Microarray Probes on PGSC0003DMT400010294
Probe ID | Chip | Probe Sequence |
---|
CUST_3709_PI426222305 |
JHI_St_60k_v1 |
GAGATCTGTATGCATTTTATCATTATGTTCAGTGTGAAGCATTTTATTTGAGCCGGATGT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400010294
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400010294 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT4G36990.1 |
+3 |
9e-76 |
245 |
152/310 (49%) |
heat shock factor 4 | chr4:17440660-17441706 FORWARD LENGTH=284 |
Transcript Sequence (1710 bp)
>PGSC0003DMT400010294 1710 pgsc_dm_v3.4
TTCTCTTCCATTTTCAACATTTTTTGTTCATTAAAGTTTTCAAACTTGAAGAAGAGAGAG
AGAAAAGGCTGAAAATTCAACTTTTAGAGAAAGAAAAGATAGTTATGGTCGTGTTGTTCT
TGGTGAAGATTGGCAAAGTTGTAGCCAATGGAAGATTCTAAGATAATCATCAATCGTCCT
AAAAATAATATTGTTCATTCTCTAGTCTTTCTTTTCGGTTTCTATTGTTGGGGTTGGGAA
TTCCTCACTGCCCTTTTGCTTTTCAGTTATTGCTTCTTCTAATTTCCTCTTCTTTTTTTT
TCCTAATAGAATCTTGTCAATTAATTTTTCAAATCCCCAAAGGGTTTTTTTTCTTCTAAA
ATTTGATAGATTTAGAGAAAGAAGGGATGTCGCAAAGAACAGCGCCGGCGCCGTTTCTGT
TGAAGACGTATCAGTTGGTGGATGATGCGGTTACTGACGATGTGATATCTTGGAATGAAA
TTGGCACAACGTTTGTGGTGTGGAAAACTGCTGAATTTGCAAAGGATTTGCTGCCCAAAT
ACTTCAAGCACAATAATTTCTCCAGCTTCGTTCGACAGCTTAACACCTATGGTTTTCGAA
AGATTGTGCCTGACAAATGGGAATTCGCCAATGAGAACTTCAAAAGAGGACAGAAGGAGC
TCCTCACAGCAATACGCCGTCGGAAGACCGTGACATCAACCCCAGCTGGTGGAAAGTCTG
TGGCAGCCGGGACTTCAGCATCTCCGGACAATTCCGGGGATGACATAGGTTCAAGTTCGA
CCTCGTCCCCGGACTCCAAGAACCCGGGATCCGTGGACACCCCGGGAAAGTCGTCCCAGT
TCACGGACTTGTCGGATGAGAATGAGAAGCTAAAGAAAGACAACCAGATGCTGAGCTCAG
AGCTGGTGCAGGCGAAGAAACAATGCAACGAGTTGGTTGCCTTTTTGAGCCAGTACGTGA
AGGTTGCACCCGATATGATCAACCGTATCATGAGCCAAGGAACCCCATCGGGGTCCAGCC
TTGAAGAGTTGGTCAAGGAGGTTGGTGGTGTTAAAGATTTAGAAGAACAGGGTAGTTATA
ATGACAACGATGATAAAGAAGACGATGACGAAAAGGGTGATACTCTAAAACTATTCGGTG
TGTTGCTGAAAGAAAAGAAGAAGAAAAGGGGTCCGGATGAGAATATTGATACTTGTGGGG
GACGTGGTAAAATGATGAAAACTACTGTGGACTACAATGGTCCTTGGATGAAAATGTCTT
CGGCGGCCGGAGAAAGCAGCAAGGTTTGTAACTGAGGTGAAGTTGATGAATGTGTTTTGA
GGTTGGAGCAGAGTAAATTAGCTTCTCCCTTTTGATTTAGTAATTTCCTTTGGATTTACA
AGTTTGATGTTTATGAATAAAATAAATAGAGAATTTAATTAGTATGAGTAGTAGAGGGGT
TAGATTACTGCTAAGAGTAGTAACCCCAACCCCCAACTAGAAATCATAAATATATATATA
CACACATACAAACTACTATCAAGTCAGATGCAACTGCTGCAGCCCTGAAGTTTGCTTTGT
CTAGTCGAAACTCATCATAATAATAATGGTTCTTGATTTGTGACTTTGGTTTGATATGTA
TTTAGAGATCTGTATGCATTTTATCATTATGTTCAGTGTGAAGCATTTTATTTGAGCCGG
ATGTTTTTTGAAAAGAGCTTTTTATGTTTT