Microarray Probes on PGSC0003DMT400009066
Probe ID | Chip | Probe Sequence |
---|
CUST_5036_PI426222305 |
JHI_St_60k_v1 |
AGTGTTATTGGCTTCATTGATCCTTTTCTTAGTGCTATTCAATGTTATATGCAGCTAGTG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400009066
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400009066 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT2G18170.1 |
+1 |
0.0 |
629 |
294/367 (80%) |
MAP kinase 7 | chr2:7908178-7909374 REVERSE LENGTH=368 |
Transcript Sequence (2286 bp)
>PGSC0003DMT400009066 2286 pgsc_dm_v3.4
GAAGAAATAATGAAAGCTATTCTTGAAAATTAAATAACAGTAAAATTAATTTGTCGATAA
GTATTAAATTATACTAAGTATTGTGCATGAATCTGAACTAGTTTATAGATATACGGTAGC
TGTCGTGTTCTTGAGATAATCGTCCTTCCGTCAAATACCCCTTTTATTGTCCTTTCTGTT
TTGTTTTTCTTTCTATTTTAATATCGCTTTGAGTTCACGCTTACCAATTACTTATAATCA
ATTACAGATGTGAAGAACTATATGGGTTTCCTAAATTCTTGCTTAATTTTGATTGCGTGA
ACCCCATCTTTGGTTTCTTGATAAAAAATTTGAAGCAACTTTTGTTCTGTATTTCTCTGC
TTTGAGTGAAATTTCTGGAGGAATTTATGATACTTTCGGTTTACTTATGCTTTTACACTG
AGAAAGTTGGAAAAAGTTGTTCTGAATTTGGTGCAAGATTGAAGGTAAAGAAAAGGGGAA
ATTTCTGAATTTAATAAGTTGTAGTGGAAAAAAAAGAACAAGCGGATCAGAAGAAGATCG
AATCGACACAAAACAAAAGAAATGGCAACTCAAGTGGAGGCTCCGAATGGAATTAGGTCA
CGAGGGAAGCATTATTACACAATGTGGCAAACTGTATTTGAAGTGGATACGAAATACGTG
CCGATCAAACCTATTGGGAGAGGAGCTTATGGTGTGGTTTGTTCCTCAGTGAATAGGGAG
ACAAATGAAAAAGTTGCTATCAAGAAAATTAATAACGTGTTTTCGAATAGAATTGATGCG
CTCAGAACTCTAAGAGAATTGAAGTTATTGCGGCATATAAGGCATGAGAATGTGATTGCT
TTGAAGGATGTGATGATGCCTATTCATAGAAGTAGTTTCAAGGATATCTATTTGGTTTAT
GAGTTGATGGATACGGATCTTAATCATATCATTAAGTCGCCGCAGCCTTTATCTGATGAT
CATTGCAAGTATTTTCTTTTTCAGCTCCTTCGTGGCTTGAAATATCTCCATTCAGCTAAT
ATTCTTCACCGGGACTTGAAACCTGGGAATCTCCTTGTGAACGCCAACTGTGAGTTAAAG
ATTTGTGACTTTGGACTGGCTAGGACTAGCAGAGACAATGGGCAGTTCATGACTGAATAT
GTTGTAACTCGTTGGTATCGTGCGCCTGAGCTACTTCTTTGCTGTGACAATTATGGAACA
TCCATTGATGTCTGGTCTGTTGGATGCATCTTTGCAGAAATTCTTGGCCGGAAGCCTCTA
TTCCCAGGAACTGAGTGCCTCAATCAGCTTAAACTTATTCTCAATATCCTTGGTAGCCAG
CCTGAAGCTGATCTTCATTTCATTGATAACCCAAGGGCTAAAGGATTCATCCGATCTCTT
CCTTTTACCCGAGGAGCTCACTTTTCTTCTCTTTTCCCTCATGCTGATCCTTTAGCAATA
GACTTACTGCAGCGAATGCTCATTTTTGATCCCTCAAAGAGAATAACAGTTACAGAAGCT
CTCTATCACCCTTACCTATCAAGTCTTTATGATCCAACGTGCAATCTTCCCGCTCAATTT
CCTCTTAATCTGGATATTGATGAGAATATGGCAGAACCATTGATTCGGGAGATGATGCTG
AGAGAAATCTTTCATTACCATCCTGAAGCAGCTTATATCAACACATTTTACTAGTTTCCA
TCTATGTAGTAGTACTATATTACTTCCGATTGGGACACAAGAAGAAGACCTAAGCAAAGA
AAGGTAAGTGGGATTTTTTGTTCTGTACTATGATAAAAATACGCAGTTAAGATGTTGTGG
TCACTTGGAGACATTTGGAGCAGGGAGGAGATCAATCTGAGGATCACTTGAGGTTATAAT
TGGAGACTTCATTTCATCTTCTTTACTTTTAGATTATTAGCGAGAGTAAGTTGTCTCCGT
ATGACCTATAGGTCACAGATTTGAGTTATGAAATCAAATTATTGATGCTTGTGTCAGGGT
AAGCTACCTACCGGCTGCATCACACCCCCCTTATCCTGTCCCGGAACGCATACTTGGTAC
ACCGAGCTGCCTTTTTTCTTGTACTTTTTAGATTGTTACTCCTTTGTATGAAATATTTTT
GGTGTGTATTGAGCTGAGGACCGAATAAGGCAATCTATTTAGCCTGTCCATATGGACCCT
TGGACTAGACTTCTTGTAAGCTGTACATAATTTATGGGCTAAGCTTCCCATTTTCCTTCC
AGCTCGAGTGTTATTGGCTTCATTGATCCTTTTCTTAGTGCTATTCAATGTTATATGCAG
CTAGTG