Microarray Probes on PGSC0003DMT400008363
Probe ID | Chip | Probe Sequence |
---|
CUST_17495_PI426222305 |
JHI_St_60k_v1 |
TCTGAGATGTTCATGTACCCAGAAGTGTGGATAAAGAAGATGAACAAGTTGGAATAATAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400008363
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400008363 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT4G00880.1 |
+3 |
5e-33 |
119 |
56/72 (78%) |
SAUR-like auxin-responsive protein family | chr4:366692-367060 REVERSE LENGTH=122 |
Transcript Sequence (826 bp)
>PGSC0003DMT400008363 826 pgsc_dm_v3.4
AAAAAATTTATTTACAGATAGATATATGCGTTACAATATTGAAAACAACGCCTCTGTTTT
TATATAGATAGATCATGAGCAACATACCAAAATCTTTAACAGATTCTTCTTTTACTCTTT
TCAAATTAGCCATCTCTTCTTCTGATCCTTGGCCTTTCTCTCTTCCAATTTCTTCCATCT
AACACCCCTCAAAATCTCTCTCAATTGTACAGTCTTTTCTCTCAATTTCTTGTTTTTTCC
TTCAAATCTTGATAAAAGCAGAGATGGGTACTGGAGAAAAACACCATCTGAGTTTCCATT
TTCATGTTCCACACATTAACTTCCATCATCATCATAATCATGGGAAGAAGGAATTAAAGA
ATATACCAAAAGGGTGTCTTGCAGTTATAGTGGGTCAAGGTGAAGAACAACAGAGGTTTG
TCATCCCTGTCAATTATATCAATCATCCCCTGTTTTTGCAACTACTTAAAGAAGCAGAGA
AAGAATTTGGATTCGATCATAAAGGACCAATTAATATCCCTTGTCATGTTGAACAATTCC
GCTATGTTCAGGGATTGATTGCTAAGGAAAATCCGCATAATCATCATCATCACCATTCAT
GGTGCTTCAAGACCTAAACCTTTTTTTTCTATAGTTACATATTTTGGTAGTTTTTTTTTT
TTGTTATTTTGGACTCGGAATTGTTAGTGCTTCGAATGATGTAAATTTCTAGTTTTGGAT
CGAGTCCTTTTTGGGCTTTTTTTTAATGCTCTGTTCTGAGATGTTCATGTACCCAGAAGT
GTGGATAAAGAAGATGAACAAGTTGGAATAATATTCATAATACAGA