Microarray Probes on PGSC0003DMT400007215
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_12291_PI426222305 |
JHI_St_60k_v1 |
AGATGATTTCAACCTTACCCTTTATCCCGGTGATCGATGCCTTCTTGTCGGATCTAATGG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400007215
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400007215 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G02270.2 |
+3 |
2e-163 |
470 |
267/359 (74%) |
non-intrinsic ABC protein 9 | chr5:467269-469041 REVERSE LENGTH=354 |
Transcript Sequence (1454 bp)
>PGSC0003DMT400007215 1454 pgsc_dm_v3.4
AAATGAAGACCATTGAATTTGTGTCGCCCGTCGGCGAGTTGCGAGTATGGTAGTTGGAAG
GGAAAGTACATATACGTGGGAAATAAGCAAAGAACGTGGCCATGGCTGAATCCTTGCATA
ATTAATTACTACTATATTAACCTGTTCTCACAAGCTGAATTTGTACACTACTTCTCTACC
GCATTTCATCGAACACTTGAAAGGTTATGGCCGTAAAGGAAGACAAAAAGCCATCAGTAG
AGATCAACAATCTCAAATTCACCTACCCTGGTATCGATGGACATCCGCCTCCCGGATCTA
CCCCTTTGATAGATGATTTCAACCTTACCCTTTATCCCGGTGATCGATGCCTTCTTGTCG
GATCTAATGGCGCAGGGAAGACTACAATTCTGAAGATATTGGGAGGAAAGCATATGGTAG
AACCAGACATGGTCAGAGTGCTTGGAAGATCTGCATTTCATGACACTGCTTTAACGGCTT
CTGGAGACCTCAGTTATCTTGGTGGAGAGTGGAGGAGAGAAGTTGCATTTGCTGGATTTG
AGGTGCCTATCCAAATGGATGTTTCTGCTGAGAAAATGATTTTTGGGGTTCCAGGAACTG
ATCCACAAAGACGAGATGAACTAATTAAGGTTCTTGGTATCGATCTGTCCTGGAGAATGC
ACAGATCATCTGATGGGCAAAGAAGAAGAGTGCAGATATGTATGGGTCTTCTGAAACCAT
TCAAGGTACTACTTCTCGATGAGATAACAGTTGATCTGGATGTTCTTGCAAGGTCTGATC
TTTTGAAATTTCTGATCAAAGAATGTGAAGAGCGAGGCGCTACAATAATTTATGCAACAC
ACATTTTTGATGGTCTTGAGAACTGGCCTTCTCATTTAATATATGTGGCTCATGGGAAGC
TGCAATTAGCAATGCCAATGGACAAGGTGAAGCAGATCAGCAATTTATCACTAATGAGGA
CAGTAGAGAGATGGCTGAGGAAAGAAAGAGACGAGGAGAGGAAACGAAGGAAAGAGAGGA
AGGCAAAGGGCCTTCCGGAATATGAAAAACAAGTTGAAGGCACTCGAGTGGTAGGGGGAG
ATCCAGGTCGTGCTGCTGGTCGTCCATTAAACAATGGTTGGGCTGGTGGAACACTACATT
CTACTATTGCTGGCGAAGAAAATTTTTTCTTAAGCTCAAACCGTGTTCTAAGATAAAGAG
AACTGATGCACACTTCTTTGGAACTGGTGTCAACGTACTTTACCATTTCATTCTTTCTGG
TCAGATGACCATGAAACTAGGACTAATAAAATTTTAAATTTGTAGAATAGAATTATCTCT
GTTCATTTGGTTTGTATACGTATCTCCTATTCTCTATATGTTCTTGTTGGTGTAATCTTA
CAAATTGAATAGGTTAAATTGTTGTAAACACATTGCGAGCCCAAATGTTTTTCCAAGTTG
TGATTGAAGTTTCA
