Microarray Probes on PGSC0003DMT400006691
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_9559_PI426222305 |
JHI_St_60k_v1 |
CGGCCAATCTAGCTTGAACTGTATATCTGGAACAAGGTCAATATTTATGCAACAATTATT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400006691
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400006691 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G51760.1 |
+3 |
0.0 |
614 |
301/445 (68%) |
peptidase M20/M25/M40 family protein | chr1:19199562-19201424 FORWARD LENGTH=440 |
Transcript Sequence (1755 bp)
>PGSC0003DMT400006691 1755 pgsc_dm_v3.4
CTTTATAGTGCTCATCTCTTAGCTCTTACTGCCAAAGGAACAATATTTTAATTCAATACG
TCTCCCATTTCAATTGGACCCTCAATCCATTTTCCCCATATTTTCATCATTCTCACCTAA
TCAAATAATGTACAGAGTCCACTGTTGAATTTGTTCCTTTCTTCGCCTACTCCATTATTT
TTCATCCACTCTTCTCTTCCATCTGTGGGTTTCTTCCAACTTTTTTTTCTCATATGGATA
TCTCCAGATGGGTTTTCTTGATTTTGATTTTTGTTTCTTTTTCCCCCATACCCATCTTCT
CAGATTCTCAATTGCGTTCAGGGGAACTATCAGAAATACCGAGTAAATTTCTTGATTTTG
CGAAGAAATCTGAGGTTTTTGATTGGATGATGGGGGTTAGGAGAAGGATACATGAGAATC
CTGAGTTGGGTTATGAAGAATTAGAGACTAGTAAGCTTATTAGAGAAGAATTGGATAATT
TGGGGATTCAGTATAAATACCCTTTTGCGAATACTGGTATTGTTGGCTTCATTGGTTCAG
GAAAACCCCCTTTTGTTGCGATTAGAGCGGATATGGACGCTCTTCCTATGCAGGAAATGG
TTGACTGGGAGCACAAAAGTAGGAATCCTGGTAAAATGCACGCATGTGGACATGATGCTC
ATGTTGCAATGCTTCTTGGTGCTGCAAAGATTCTTCTAGAACATCAGAACATTTTGAAGG
GAACAGTTGCTCTTGTTTTTCAACCAGCAGAGGAGGGAGGTGGTGGGGCCAAGAAAATGA
TAGATGCTGGAGCACTAGAAAATGTAGAAGCAATATTTGGTCTGCATGTCCATCCCAACT
TTCCTTTGGGTAAAGTTTGTTCAAGACCTGGACCCTTTTTGGCGGGAAGTGGTTTTTTTG
AAGCTGTAATTAGTGGAAGAGGGGGTCATGCCGCTATTCCACAGCATTCGATAGATCCAA
TTCTGGCAGCATCAAATGTAATTGTCAGCTTACAACATCTTGTTTCACGAGAGGCTGATC
CTCTGGATTCTCAGGTAGTGACAGTTGCTAAATTCCAAGGAGGCGGTGCATTTAATGTTA
TTCCAGACTCTGTTACCATCGGTGGCACTTTTCGGGCTTTTTCAAAGGAGAGCTTTCTGC
AGCTTAGGCAACGAATTGAAGAGGTTATTGTTGGGCAAGCTGCTGTACAGAGGTGCAATG
CAACTGTGGATTTTCTTACAAACGACAAACCCTTCTTCCCTCCAACTGTGAATGATAAAA
ACTTGCACAAACACTTCCAGAGAGTTGCAGGTGATATGCTTGGTAACGATCATGTAAAAG
ACATGGAACCACTAATGGGATCAGAGGATTTTGCGTTTTACCAAGAGGTTATCCCAGGTT
ACTTCTACATGCTCGGAATGCAGGGTGAAACAAATGAAAACCCTGCATCAGTCCATTCAC
CTTACTTCAAAATAAACGAAGAAGCACTTCCTTTTGGTGCTGCACTTCAAGCATCTTTGG
CTATTAGATATCTTCTCGAAGCACAACCACAAGTTCCTTTATCAAGTATAAATGGTCACG
ATGAATTGTAAGGTGCTACTCTTTTGTAGGCATGTGCACCGAAATAGATCCTTGTTCATT
TTTATGTAATGCTGGAACCGGCCAATCTAGCTTGAACTGTATATCTGGAACAAGGTCAAT
ATTTATGCAACAATTATTTACTTCAACAACAATAACAACGTTGTACATTTTCTAGCAATT
TGTTTTCCTGATCTT
