Microarray Probes on PGSC0003DMT400006446
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_9546_PI426222305 |
JHI_St_60k_v1 |
CCTCTTTCAATGCTGAATTGATGTGATGTTGGCTTTTCTTTTCCCAATCTACTCCCTCCG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400006446
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400006446 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G25910.2 |
+3 |
3e-113 |
245 |
116/172 (67%) |
3-5 exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein | chr2:11049379-11051997 REVERSE LENGTH=342 |
Transcript Sequence (1879 bp)
>PGSC0003DMT400006446 1879 pgsc_dm_v3.4
AAACTATTTGAGAATTGACATCATGTAACTTCCAATTTTCCAGTATCAACATAGGTAAAT
GTACGAAACACAGTATAGCATGCATACCCCGCGGCCCCGCCTAAGCAGAAAGAGAGAAAA
GTAGGGCTAAAAGCACTATTCTGCAGGCATTTAGGGTGCTTCGTTTGTGTTGTATCCATT
GAACATTAGCAGTAGTTATGGATATTGAATGTGTAAGGTCCAATGTTAAAAACTGATTGT
TTTGTTGGTGTTCATTTCAAATTTTTCAATCATATGGCTTTAGCATCTAGTCCTCATCAA
ACTTACATTCCTCTCCCATCTTCCAATTCAGGTGGTAGGCATGCTGATCATGAAGTAGTT
TTAAAACCAGTCCCCATTTATATCATCAGCCATGAATCTCAACTTCCAGCCACATTTCTC
AACCCTTCTCCAAAAAATGAGATGGTTGTTGGACTTGACTGCGAGGGTGTTGACCTCTGT
AGATATGGAACTCTCTGTATTGTGCAGCTTGCTTTTCCGGACGCTATCTACTTGGTTGAT
GCAGTACGCGGTGGGAGAAAGTTGATTAACGCTTGTAAGCCTGCTCTTGAGTCTGTTTAT
GTCACAAAAGTTATTCACGACTGCAAACGGGATAGTGAGGCATTATACTATCAGTTTGGT
ATCATGTTGCACAATGTTATGGATACCCAGGCATATCATACGTGGAGAAAAAAGAAGTCC
GTTCCCTTCTGAAAGAGGATCCTCAGTTTTGGACCTACCGACCATTATCTGAGCTAATGG
TCCGTGCAGCTGCTGATGATGTTCGATTTCTTCCATACGTATTCCATAAGATGATGGAGA
AATTGAGTGAAGAATCATTGTGGAGACTTGCAGTTCGTGGTTCACTTTGTTGTCGGTGTT
TCTGCATAAGTGACAACGAATATGCTGATTGGCCAGCAATCCCTTCTATTCCAGAGTTCC
TCAATGTGGAAAGAGATACTTTAGAAGACGAGATCTTGTCCATACTTGATGTGCCACCCG
GGAAAATGGGATGTGTTATTGGTAGAAAAGGATCCTCAATTTTGTCAATCAAGGAATCAT
GCAAGGCAGAAATCCTAATCAGTGGATCGAAGGGAGCGCCAGACAAGGTTTTCATCATTG
GACCCCTGAAGCAGGTAAGGAAAGCAGAAGCCATGTTGAGGGGCCGGATGTTGTGACTTG
TGAGACAACCCTTTTGCTGCACCTGGAAGCCAAAGCTTTGCATTCGTATTACCCGATCAT
CACACTAAACAAATCTCAAGGGAAACCTATCTCACGTCTTTTTGCTAATATACAAACCCT
GATCTCCCAAATGCCAATTCATTTCACATTCGACAGGGTTCTAAATCAATGCATCTATCG
TTGAAATTAAATTCGTACTTGTTTTACACGCCAATTTGAATGTATTTTAGCGCCTAATAC
TTCTCTTACGTGGATGGGGTAGACATTGTTCCTTAGGTCAGTTGTGAACTTGATTGGTGG
AGTGGTCTTGGGGGGTCATTGTCATGCCCACGGAGTGGCCAGCTTGGGAATTTTGAGAAT
GATACTGGATAGGAGTGGACTATAAAAATCTAGTTGTAATTGTTGTAGTGGGAGCCATGG
GGGAATAGTTCTAGAAAATGTGGAGAAAGTGACAAAGGGATAAAAGCTAGCCCCCCCTTC
TTCACAGTTCACATGACCACACGGTGACTTTGGGGGATTGCGGACAAAAGAGGTCGTTGG
TGGGCTTAAGGCCATTGAATTTGAAACAGCGTCACTGTACAATGCATGTACAGCAAATGT
TTCTTCACATACAAAGAAACCTCTTTCAATGCTGAATTGATGTGATGTTGGCTTTTCTTT
TCCCAATCTACTCCCTCCG
