Microarray Probes on PGSC0003DMT400006092
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_35269_PI426222305 |
JHI_St_60k_v1 |
CGGGCCTTTGCCCTTCTAGTTCTACTATATTATAAAAGAGAGTTTAGGCACAAATATAAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400006092
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400006092 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G62020.1 |
+3 |
1e-24 |
108 |
50/65 (77%) |
Coatomer, alpha subunit | chr1:22919814-22923728 FORWARD LENGTH=1216 |
Transcript Sequence (1595 bp)
>PGSC0003DMT400006092 1595 pgsc_dm_v3.4
TTTTTCCATTCTAATCTTCTACAATCTCTAGATCAATTGTAACCTTACTGCACCATCTCC
AAATATCTTATTTTCCTTCATCTCCTCTTGTTCTTAACCATGGCACTTTGGAGAGAGTTT
ATAGCTACCTCCTATCTCAGGCTTTGATGAAAGGAGAGAAATAAACTATAACATGCTTTT
ATATGGCAAGAGACACTTAAGTTTGCAGACACAATGGGAGTAATAGAGTGAAAGGTTTGG
GTTTTCACATCTAAAGGCTATGGATCTTAGCCAATCTTCATAGTGGGTTTATTCAGCTAT
GGGATCACCTTATCGGAACTCTCATTGATCGATTTGATGAGCACGATGGCCCTGTTTGTG
GTGTCCATTTTCACAAATCTCAGCCTCTATTTGTTTCTGGAGGGCAACAACATCTGTAAG
ATTAATTCAAAAGGGTCTATTTCATTGCTATTGACACTTTTCTTTCTTTCATCTTCCTAA
TTCCTCTGGTAAGCTTCATGCCAGTCTGACTAAGGTAAGGGGGAAGACCTCATTTCGTCA
TTCATATCTATTCTTCTTAGCCCTGCTTTGGCGATTCAATCCGACATTTCATTTCACCCT
TCATCATTTGATTCTTCTCATCTAAGAGCTGATCTTGCAAAAGGAGCACAGTGCGACAAC
AAGCGAAAATCAGCAAACAGATTGCCAGTCTCAGGTGTTCTTCAAGATTCTCATCTACAA
CTTCAGTTGTATGAAAACAGAGACACTATCTCTTACCTATTTGCAAATCAGTTTTTTGGA
ATGTTACATATCCCTACTCCATATATACTGATCTCCACAGAGAAGTACCTTGCTAGAGTA
CCAACAACGAATTTCAGCCTTCTAATGGAGCTGTTACAATCTGTCCCTACAGACTCAGGC
AGGAAGAACTCAATTTTCTGGTTGGTAAGCAAGAATGAGAGTTCTCTGTTAAAAGTTATA
TTAACTTACTAAAACAAACTAGCTGCTGGGATTTGAGCTGCCCTTGGGAAATGATCTGGA
GGATCAATGTACCTCCTAAAGTTGCTTGCTTGGTTGGATAGCAGGTAAGAATGTCTATTT
GATTCATGATAGACTCCAAAAGAGAGGTTAGTCTCTATATTTGGGTGGTGCTTTTGGGAG
AGTTTCATTGAAGTTATTAGTCTTCCGCCCGCTTCTTCATTGCAAGCCAAATTTGCATAT
ATAGTCACTGTTTCTGAACCTATTTGGAATTAGTTGGGTCATGCCAATGGAGGTTAAAAA
TATTCTCAGTTGCTCGCTTGGACAGAGTATCTGCAGGACTTTGAAGACATCTTGGAAAAC
TATCCCATGATGCATTTTATGTACTGTTTGGCTTGAAAGGAACAGAAGATGTTGCCAACA
TTTTTTTCCTCCATTGTCATTTTCTTTGGGTTAAAATTGGTGTTATTTTCTCCTTCAATT
GTGTATACAAGCAAGTTTATGTTGGGCCCGTGCTAAGCACGGGCCTTTGCCCTTCTAGTT
CTACTATATTATAAAAGAGAGTTTAGGCACAAATATAATATATAATATTCTTGTGGGACT
TTTAAAAGGAAGTTTCTTCAATATTACATATTATA
