Microarray Probes on PGSC0003DMT400005245
Probe ID | Chip | Probe Sequence |
---|
CUST_41061_PI426222305 |
JHI_St_60k_v1 |
GGGCTCATAACAGTTATGCATTTATCTATTTTTAGGAATGTATAGCCCGTGTACAACATA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400005245
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400005245 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT3G01280.1 |
+2 |
1e-137 |
404 |
199/276 (72%) |
voltage dependent anion channel 1 | chr3:85754-87612 FORWARD LENGTH=276 |
Transcript Sequence (1718 bp)
>PGSC0003DMT400005245 1718 pgsc_dm_v3.4
GGCTTCTGTTGCTTTTATATACTCTGCACTCTACTTCTACATATTGTTTTCTTCTCCATA
GCTGCAGAGCTTTTGTCTCCATTTCTTCTTCTTCTTCTCTGTGATATTCGATTCAATCAT
GGGAAAAGGACCTGGTCTCTACTCCGATATCGGCAAGAAGACCCGAGATCTTCTGTACAG
GGATTACCAGACTGACCACAAATTCACAATTACGACCTACTCTCCTACCGGAGTTGCTAT
TACTTCATCTGGATTGAAGAAAGGTGATCTATTTCTGGCTGATGTTAACACTCAGTTGAA
GAACAAGAATATCACAACTGATATAAAAGTAGACACGAACTCAAATCTTTTGGCAACTGT
TACTGTCGATGAAGCTGCTCCTGGGCTGAAGACAATTTTTAGTTGCCGAATTCCTGATCA
AAGTTCTGCAAAGATGGAACTTCAATATTTACATGACTATGCTGGGATATGCACCAGCGT
TGGGTTGACAGCAAATCCCATTGTCAACTTCTCTGGTGTCTTGGGAACCAATGTTCTTGC
TCTAGGAACTGATGTATCCTTTGACACCAAGGCAGGAGCTATCACAAAGTGCAATGCAGG
CTTGAGTTTCACAAATGCCGACCTCATTACTTCCTTGAATCTTAATAACAAGGGAGATTC
TTTGAGTGCATCATACTACCACATAGTCACCCCCCTGACTAGTACTGCTGTTGGTGCGGA
GGTGACCCATAGCTTCTCTACCAGTGAGAACACCATCACTGTTGGAACTCAGCATCAATT
GGATCCCTTGACGACTGTTAAGGCAAGGGTTAACAACTTTGGCACGGCAACTGCTCTGAT
CCAGCATGAGTGGCGTCCAAAGTCTCTTTTCACCATTTCAGGAGAGGTGGACACCAAAGC
TGTTGACAAAAGTGCCAAATTTGGACTAGCCTTGGCTCTTAAGCCATAGGCATAGTCAGA
GGTTTAGGACAATCACCCGTAGACAATGGACTATTGAGCAAATTAGAAGACTTGTTTCTG
TGGCAATTTATCTGGTAGTTCTGGACTGAAAAAATAATTTTAGGTGGTTGTTTCAACCAA
CGTCGTGTCATTCTGACATCGTACATTCTTATTCTCAACTCTTTTTGACAACTCTTTTTG
AAACTGATGATGGGTAAGTTGGGTACCTCATTATACCCATAGACTCGAGGCTTGAGAGTT
TTTTGCTCGAGATTTTTGTCCAAGTAAAAGCGCATTGTTGAAGAATCATTATCCATAATA
TGTTTTCTACTTGGCATGTTCCAAAATTTATCCTTAATTCGTTGGATTTAGTTTGCATTC
ATCTACTTAATTTTATGATAATTGCAGTGGGAAAATTGTTCTTATTTGCTTGCTGTGTTT
GGGTATGCCATGATATCTTGCAAGTTGTTAGCTGGTCTGCTGTTTAAATTGTTGGGGACT
GCTGTGGGTTTGTTGCTGATGGCTGAGGCAATATTGGTGGCCAGAGATTGAAAATTAATT
TGCTCTATAGCCCATGTGTATCAGGCTTTTGTCTTCGCTTCACTACTTTATGAGCAGGCT
GCGTCAAGATAATCAAGGAAACCAGGGTGACTTGGCTTAGAACAGTTGTGCATTTATATA
TTTTAAAGAATGTATAGCGTGGGTGATAATCCTATAGGGCTCATAACAGTTATGCATTTA
TCTATTTTTAGGAATGTATAGCCCGTGTACAACATAAT