Microarray Probes on PGSC0003DMT400004864
Probe ID | Chip | Probe Sequence |
---|
CUST_43704_PI426222305 |
JHI_St_60k_v1 |
ATTTAAGTTTGGGCTAGTTAATGACTCAGTACCCATCTAAGATTTGGGCTTGAAATTATC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400004864
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400004864 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 |
AT5G14620.1 |
+2 |
4e-157 |
484 |
238/358 (66%) |
domains rearranged methyltransferase 2 | chr5:4715429-4718578 REVERSE LENGTH=626 |
Transcript Sequence (3305 bp)
>PGSC0003DMT400004864 3305 pgsc_dm_v3.4
GTCCTTACATGTTTGGTTATCCTCATAAGTCCTCTCTTTCTTCTTTCGCTTAATTTGTGA
AAAAAACTGATTTTTTCATCACTTTCTACACTTTACTCTGAAAAAAATGCATATAGTAGC
GATATAATTCGTCTATTAGGTAGTTAAATATATCTCGACAACTAAATTTTGGGTGATGAT
TTATTCTTGTCGCTGAAGAGTTCGGAGTTCTTTTTGAGGAATTACCTTTAAAAATGGATA
ACAACTTTTCTGGAGAAGACAATGACAACATTGACTGGGATACTGAAGATGAATTAGAAA
TACAAGAAATACCGGACGCAACATTTTCCTCGTGCACAAATTTAAGAAATGTTGGACATC
ATACTGTTAGTGGTCATGGGGAGGTATATGCTTTAATCCTTGTATTCGATATCTAGTGAT
ATTTGTTGTCGAGGAACATTGCATCTCAATTTATGGCCTCTTTTGGTCTTCTCGTACGTG
AAGGCAAGCTCATCATCAGTACCCTGTCAATCCAAGTTCATTCAACAATTTATTGTGATG
GGATTTCCTGAAGAATCTATTGCAAAAGCGATAGAGCAAAATGGTATTTCAATTGCCCGA
GTCTTTATACAACTAAAAAAATGATTTTTCAATTGTCGTATTGATGTTGTTGGACTTGAG
ACACAGGAGAAAATGAAGGTTTGGTGCTAGATGCTCTTTTGACATTCAAGGTGTGTAAAA
TCTGCCTCATTGTTTGCCAACCACCTTTTTCTCTACTTATAGCTGCCTATACGTTCCGCC
ACTTGCATAAGGTTTTCTTAGATCAGTCAGCGGTTTAAATGGACGGCTATTAACCGATGA
CGATATTCTGTCATTTGAACGTTTCCCTAGGTGGTGACTGTGCAATGTATGATGCCAATT
GTGTTAGAATATACTGAACTTTTATCTGTCTTCATTGTAATGATGACTTTCTTCTATCGT
TTCATTTTTCACTAGAATAGAAGAGGAAACAAAAATAGAAAAATTATGATCTTTATTTGC
ATAAACTTTAGTACCACGAATCGTACTTTTTGTTTGTCTTTGGATGTAGCAGGCACTTGA
AGATTCTCCTGAAGAACAGCCTAGTACGAGTGCACAGATGGAACCCAGCATTAGTTCTGA
TGATAGCTCTTCTCAATGCAACGAGAACGTTTTGGATGATGTTTATGAAGATGATAGTTG
GTCCTCGGACTCGGACAATTGTATGAATTCTGCTAAACAGACTTACTTGAATGACGACAA
CAGTTCTTTGTCTGAAAACGAGAATTCATTATTATTCCTAGCAAATATGGGATACCCCGC
GGAGGAGGCTTCCATAGCGATGGAGAGATGTGGTTCGTATAATTTTTTATATGTTTTGTC
CTCTGTTGTATCTAGGACAAAATCTGCTTATTAACTCTGCAATATACCTAAATATCTTTT
TGGAATCGCGATATCTATTTTTGATTTCATTTCCAGATTATTAAATGTCTTCTTCACAAC
TTTCTAGGTCCAGAAGCATCGTTTTCGGAGTTGATAGATTTCATGTGTGCTGCTCAAATG
GCAAGAGAAGAAGACGTCTATCTGCCCGAAGATGAAAAGGTCTGTTTTCCTCTTGCAGTA
TTTTGAAATGGACTCGTGTGATGTAACAATCTGTTTTACTTTGTTCGCATTTGTAACTAC
ATATTAGCAATATCATTTCTCGTTGAATTGATGCATCCTTTCACTGGGGCAGCCAAAACT
AAATAGTGGTGGATACAAGAGGAAGATGTATAATGAACTTCCCGTAAGGAAAAAGCAAAG
GGCGATTACAGATGAAGAGCCAATTCATTTGCCCAGACCTATGATCGGATTCGGGGTTCC
TACGGAATCCTTACCAGCTATAGTGCAAAGAACTCTGCCAGAGCAAGCTATTGGCCCCCC
TTTTTTCTATTATGAAAATGTTGCTCTTGCTCCAAAGGGTGTGTGGGACACCATGTCAAG
ATTCCTTTACGATGTTGAGCCCGAGTTTGTTGACTCGAAATATTTTTGCGCTACCGCAAG
GAAAAGGGGATATATTCATAATCTACCAATTGAAGATAGATTTCCTTTACTTCCACTTCC
TCCACGTACCATTCATGAGGCGTTTCCTCTAACGAAGAAATGGTGGCCATCTTGGGATAC
ACGAACAAAGTTAAATTGTTTGCAAACATCTATTGGGAGTGCAAGGTTAGCTGATAGAAT
CAGGAAAGCTATGAAAGCGATGGAGAACTTCGATGGTGAGCCACCGTTGATGGTGCAAAA
GTATGTTCTAGATGAATGTCGGAAGTGGAATTTGCTGTGGGTTGGTAGAAACAAAGCTTC
TCCTCTGGAGACTGATGAATTTGAAATGCTAATGGGATTTCCACGGAATCATACCCGTGG
AGGCGGTATAAGTAGGACCGATAGATACAAGTCGCTTGGTAACGCGTTCCAGGTCGACAC
AGTGGCATACCATTTATCGGTGTTGAAAGACTTGTATCCAAATGGTATCAATGTTTTATC
ACTATTTTCTGGAATTGGTGGTGCTGAAGTTGCTCTATATCGTCTCGGTATTCCATTGAA
CAATGTGGTTTCCGTAGAGATATCTGAAGTGAACAGGAATATTCTGAGAAGCTGGTGGGA
GCAAACAAATCAAAAGGGGAATCTTATAGATTTCAATGATATACAGCAGCTGAACGGAGA
CGTCTTGGAGCAAATGATCGATTCATTTGGAGGATTCGATTTAGTAATTGGAGGAAGCCC
GTGCAACAACCTTACTGGAAGTAACAGAGTGACTCGAGATGGACTCGAAGGTAAAGATTC
TTCTCTATTTTATGACTATGTTCGGATAGTGGACTTGGTCAAATCCATAATGTCTAATCG
TAGAGTGTGACGAAAATATGTTTGAGTTTCTGAAGGGGATGGACTTGGAAGGCAACGAGT
AAAATGTTGTCTTTGATTTTGATTTTGGTTTGTACATATTTTTCGATGCAGTATGTTCGT
TCGTGGAAAAATGAACTGTTGAACTTCTCATTGTAAATGACATCAAATGACGTTGAAAAT
GGGTAGTCTTGAACTTTGTGATTCGTGCTGAGCTCATGAGCAAACGCCAAAAGTGTTGTC
CATGGAGCGAAAACTTATTAAATTTGAATTTTGTTCATGGGGTAAAAAGTTCAAAACCAT
CTATTTTGAATGTCATTCCTCTAAATCACTCAAATTAGTCCGTGAAATTATAATTCGTCC
AATCCATTTAAGTTTGGGCTAGTTAATGACTCAGTACCCATCTAAGATTTGGGCTTGAAA
TTATC