Microarray Probes on PGSC0003DMT400003840
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_5212_PI426222305 |
JHI_St_60k_v1 |
TAAGCCCTTCCAGTGTTCATCCAAAGAAACCTTCCAGAGCTTTATTTATGCAGATTTTGG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400003840
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400003840 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G35560.2 |
+3 |
6e-67 |
227 |
114/237 (48%) |
Transducin/WD40 repeat-like superfamily protein | chr4:16881562-16886878 FORWARD LENGTH=1050 |
Transcript Sequence (955 bp)
>PGSC0003DMT400003840 955 pgsc_dm_v3.4
TTTATTCGGACCCTTGAGATACAAAGTTCCCAGTGACCTGTTTTCCTGTGATTGTATAAG
GGGGAGTATGTGACATAGTGAAGATGCTTTTCAAGTCGACTGTTTATATTAAAAGATTGA
GTATTTGAAATCCCATAATTTGTGGTATGCAGGTGGTATTAATTGATTCTGACAGCAAGA
CCATACTGTATCAAACACATATTGCCAGTGAACTCTGTGCAGGTGTCATCTCTATGCAGT
TCAACACGTGTAGCTTGCATGGATTCGACAAGAATATCTTAGTGGTAGCGACTAAGGATT
CATCAATCTTGGCCCTTGAGACAGAAACAGGAAATATACTAAGCCCTTCCAGTGTTCATC
CAAAGAAACCTTCCAGAGCTTTATTTATGCAGATTTTGGATGGACAAGAAATGTCTGGTC
GAGGATTAAGCATTTTAGATGGTATAGACATGATTAAGGGGAATTCGGATAATATTGCAT
CAAAGCAACCATTAGGATTGATTTGTTCTGAAAAAGCTGTGTATGTCTATTCCTTATTGC
ATATTATTCAGGGTATTAAGAAAGTATACTACAAAAAGAAGTTTCATTCCTCTCTGTGTT
GCTGGGCATCAACATTTGACACACCTGAGGCCGGCCTTATGCTTCTCTTCTCGAATGGAA
AGATTGAGATTAGGTCTCTTCCAGAGTTGTCCCTTCTAAAGGAAACTTCAGTTAGAGGCC
TCGTACTTTCGCCGCCGAAGGTAAACGCCATAGCTGACCATTCAGTATGCGCGTCAAAAA
CTGGTGAACTCATAGTGGTTGACAGGGATCAAGAAATGTTCTTCGTCTCAGTTTCCTTGC
AAAATGACTCCTTCAGGTGACAAATGTTTCAGCAACCAAATCTTTTTTTTCTCATTTGAC
AGCCTACTTTCTTTTTGGCTTATTCCTGTAAAGGAATAATCGAACATAATTGCAT
