Microarray Probes on PGSC0003DMT400003464
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_1048_PI426222305 |
JHI_St_60k_v1 |
ACATGGCTAATGGTACCCTCCGTGATCACTTGTACAATACTGACAATGCTCCTCTTCCAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400003464
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400003464 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) |
Solyc02g089090.2 |
+3 |
0.0 |
1130 |
614/877 (70%) |
genomic_reference:SL2.50ch02 gene_region:45568082-45571263 transcript_region:SL2.50ch02:45568082..45571263+ go_terms:GO:0004672 functional_description:Pto-like, Serine/threonine kinase protein, resistance protein |
| TAIR PP10 |
AT3G51550.1 |
+3 |
0.0 |
723 |
427/890 (48%) |
Malectin/receptor-like protein kinase family protein | chr3:19117877-19120564 REVERSE LENGTH=895 |
Transcript Sequence (4465 bp)
>PGSC0003DMT400003464 4465 pgsc_dm_v3.4
GTCAGTTTTTAATACAGAAAAATCGAAATAACAGAATGACTTGATCATTGAAGAAGTAGA
TATCTGTACACCAAATAACAGAGAAATTTCATAACAACGCCATGTTATTCATTGCTCTGA
TTTCCTCTCTCCTATTACATCTAATGACAGTCACTATGACTCTCACGCCACAGTACGATT
ACAATGCCACAGACCATCTTTTGCTGAATTGTGTCGCAGTATTGAAAGACCCAAAGTTAG
CAGTCCCCGTTGAAGATTTCGATGGCCGTCAATGGTATACAGATGCCCACTACCCAAATT
TCCAACCTTCCAACTTTTCAAGAATATCCACAACAGCCACAGCTTTTGAACAAGACCCTT
CGGTCAATAGAGTTCCTTATATGACTGGCACCCGTATTATGCTATCTCAATTCACTACAC
TTTCCGTGTTTCCCCTGGAGCCAAATTCCTCCGTCTCTATTTTTACCCCGCCGATTACTC
TGGCTTCGATAAATCAGAATCTTTTTTTTCAGTCACTGCTAATCATTTTACCCTCTTGAG
TAACTTCAGCGCTTTCTATACAGTCGCTGCAAGTACCAATTCTAGTAAAGCTGTTCGAAA
AGAATTTGTCATTAATGTTAATGAATTTCAGATACTCAATATAACCTTTTCTCCCTCGCC
AAACTCTTATGCTTTTGTTAATGGGATTGAGATAGTTTCCATGCCCACCAATCTTTACAT
CGGTGGAGATAATCGCATCAAATTGGTGGGCCAGAATGATCCTTATTCCATCTATAACGA
CACTGCTCTTGAAACTTTGTACAGGCTGAACGTCGGAGGACATTCAATTGCTAGCACGGA
GGATACAGGGATGTATCGTGTATATGAGGAATTTGTTGTTGTATATGGCTTTCAAACTCC
TAAATTTGATGTCAACATCACTTACACTACTGAAACCCCGCCTTAAGGAAGTTTGCAGAA
TTGGTTTGCAGAATTTGTTGTTGTATATGTGTTAAAGAATGACAAAAGTCCCACATCGGT
GGTTAATGAGATGGGTGGACTCCTTATAAGGCTTGGGCAATCCTTCTCCTTTTGAGTTAG
CTTTTGGGGTGTGAGTTAGGCCTAAGAACTAATTTAACAATATGATTTACGTAACCTCTA
GGACCATGGCCAATAACAGCCAGAGCCTGGATTGGATATTCCCTCTAGATTCTGGTTTCT
ATTATCTTTTCAGGCTCCATTTTTGTCAGAATCAGCCGGAAGTTAAGGAAGTTTGCAGAA
TTGGACAAAGAATCATCCAAATTCCAAAGAAAATAACCCAAAACCTTTCCTTTCAAGCAA
ACCGACTATTGCTCCAGTGGAACATAACAGATTATTATGAAAATGAAAGGCAGCATTCAT
GGCCTACAAGAAAAAGATATACACCCCCAATTAACAACTTTTCCTCTGCCATTTCTATTT
CTCTGTGTATTTTCTTGGGTACATATATGGTCCCCTTCTTTAGTGCAATAATCCTAATAG
TAATTTCACTTACATTCTTCGATGAAGTCAACTCTTGCCTCACTGAGTTTTACTCCATTT
ATTTGGTGCACTTATAATAAGTTACTTTTGTACAAAAACAAAATTATGTCGGTTTTTAAT
ACAGAAAATTAGAAATGACTTGATCTTCGAACAGCTACTGTATATATCTGCACAACAAAT
ATCAGTATAGCACGTACATAGTTTTTCAAGACAGCGCCATGGCAACCATTACTTTACTTT
TCTTTCTCTTCTTACAACTCATAACGGCCACTATTTCTACCACGCCGCTACCGTATAACG
CCACTGTTTATGTCTTGCTTAACTGTGGCGCACAATCAGCCACCACCGATGAAACTGACC
GTCGATGGGATACTGATACTCACTTCCCAAATTTCTTACCTTCCGACTTTTCAAACATAT
CCACAACTGCCACAGCTTCTGAACAAGATCCTTCGGTCAATAGAGTTCCTTATACGACTG
GTGCTCGTATCATGAAATCTCGATTCACTTACACTTTCCGTGTTTCCCCTGGCGCCAAAT
TCCTCCGTCTCTATTTTTACCCCGCCAATTACTCTGGCTTCAACAAAGCTGAATCTTTTT
TCTCCGTCACAGCTAATCATTTAACCCTCTTGAGAAACTTCAGCGCTCTCGCTGCAGTTA
CCGATTCTAGTAAAGCTCTTCGAAAAGAATTTGTCATTAATGTTGATGAAACTCAGATTC
TTGATGTGACCTTTTCTCCCTCGCCAAACTCTTATGCTTTTGTTAATGGGATTGAGATAC
TTTCCATGCCTACCAATCTCTACATCCATGGAAACCATCGCATTAAATTGGTGGGCCAGA
ATGATTTTTTTTACATCAATAACAGCACTGCTCTTGAAACTTTGTACAGGCTGAACGTGG
GAGGCAATTTAGTTGGTAGCACAGAGGATACAGGGATGTATCGTGTATGGGATTCAGATG
ATGCATTTGTTGTTGGATATGGCTATCAAACTCCTCATTTTGATGTCAACATCACTTACA
CTTCTGAAACCCCGCCTTATTCTGCGCCGAGGATAGTTTACACAACCTCTAGGACTATGT
CCAATCACAGCCAGAGCCTGGATTGGGAATTCCCTCTAAACTCTGGTTTCTATTATCTTT
TCAGGCTCCATTTTTGTGAGATTCAGCCGGAAGTTCTGGAAGTGAACGACAGGGTTTTTG
ACATATACATTGGAAACCAAATGGCAGAGCGAGCAGCGGATGTAGTTGAATGGAGTGGCG
GCTGGAGATTCCCGGTTTACAGAGACTACGTGGTGAATGTGACTAACCCAGACGACCGAC
GAAACAAACAAAGTATTACGCTTCAATTGAGTCCTAACATGGAAACAAAAGCTGTGTATG
CTGATGCTACCTTAGGATCAGCATATTCAAATGCTATCTTAAATGGCTTAGAAATTTTCA
AATTGGGTGATGCAATTGGGAGTCTGGCCGCGTCAAATCATGAATTGCCGTCAGAAGCTC
CGATCGCTTCATTAGCTTTTCCTAACAACAAGAAGAAAAGAATATCATGGCATATCATTG
TTGCTATCATCACAGGTGTGACTAGCGGTATTGCTTTTTTCTCGATTCTGGGTTTCTTAA
TTTCCCGACGACGAAATGGGGGAAAAGATTCTGGTACAAGTGTTACCAAGTCATCATCAC
CACCATCCGATCTGTGCCGACACTTTTTAATAGCAGAGATAAAAAACGCTACCGACAATT
TTGATGAAAAATTTGTGATTGGATATGGAGGCTTTGGTAATGTTTATAAAGGGTACCTTG
ACAATGGTACAACCACAGTTGCAGTCAAGAGATCGAATCCTTCATCAAAGCAAGGGATTC
GCGAGTTCCAAACAGAGATTGAGATGTTATCATCAAAGCTAAGGCATCGACATCTAGTGT
CCTTAATTGGTTATTGTGATGATAAGAATGAGATGATCTTGGTTTATGATTACATGGCTA
ATGGTACCCTCCGTGATCACTTGTACAATACTGACAATGCTCCTCTTCCATGGAAGAAAC
GCCTTGACATTTGCATTGGTGCAGCTAAAGGATTATGTTACCTTCATTCAGGTACCAAAC
ATATGATCATTCATCGAGATGTCAAGTCAACTAACATCCTATTGGACGATAAATGGGTCG
CCAAGGTGTCCGATTTTGGATTGTCCAAAGTAGGTTCAGTAGGTGGGACAGATATTACCC
ATGTTAGCACTGCAGTGAAAGGAAGTTTTGGGTATGTAGATCCTGAATACTACAAGCGCC
AACGATTGACAGTAAAATCAGATGTTTATTCTTTTGGGGTGGTTCTATTTGAAGTGTTAT
GCGCTAGACCGGCAATAAATCCAAACTTGCCAAGTGGGCAAGTGAATTTGGCTGAGTGGG
CTAGTAGGAGTTGTAAAAAGAGAGAACTTGAAGAAATTATTGATCCTAACTTGAAAGGAC
AAATAGCCCCAGAATGCTTAAGCAAGTTTGCAGAATTGGCATATCATTGTTTGAGAAAAG
AAGGGGTTCAAAGGCCATCAATGGGTGATGTTGTAAAAACTTTAGAATCTGCATTACAGG
TTCAAGAGGGTGAAGATCATGAGGTGGAAGGATCCTCTTTTCCGTTGATTATTAATGGTG
ATGCTATGAATGAAGATGAGATATTCTCAGATTTAAGTGAAGTTGAAAGAAAATTGACAA
GCAATGGTATATCCATGTCGGTCAGTAGGAGTGCCAAAGTGAACAATGTTGCCCTTTTCT
CTGAGATTATCACTCCATTGGGTCGATGAAATTGTTATGATCATAGTTCGATACACTGAA
ATTACATGTATTTTAATTTGTTTTTCAGCTTCTTTTTGCAATTTAATGGGTACATACATG
GCCCCTATTTCATAACCCCATTGTTTGACGACGTCAACTCTTTTATGGAATGTCTTATAA
AAAATATTTCTTAAATCACTTGTAA
