Microarray Probes on PGSC0003DMT400002934
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_4357_PI426222305 |
JHI_St_60k_v1 |
CAGTAATTGTTTCGCAAAAGGGGTGAATTTTTGTTTGTTGTTTAGATTTGGGTTGTGTAC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400002934
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400002934 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G42650.1 |
+1 |
0.0 |
660 |
324/490 (66%) |
allene oxide synthase | chr5:17097803-17099359 REVERSE LENGTH=518 |
Transcript Sequence (1830 bp)
>PGSC0003DMT400002934 1830 pgsc_dm_v3.4
TATACATCAATCGTTCTATAGTCCCTACCACTACATTAAAGGAAGAAATTTCATCAAACA
CCTTTGTATCACTAACATTACCCATCCTTTTTTTGGTTCAAAACAATGGCATTAACTTCA
TCTTTTTCTCTTCCTCTTCCTTCTCTTCACCAACAATTTCCATCAAAATACTCCACATTT
CGTCCTATTATTGTTTCTTTATCGGAAAAACCAACAATCGTGGTAACCCAACCTACAAAA
TTACCTACCAGGACAATACCCGGCGACTATGGGTTGCCGGGTATTGGTCCATGGAAAGAT
AGGCTTGATTACTTTTACAATCAAGGGAAAGACGAATTTTTCGAATCAAGAGTAGTGAAA
TACAAATCAACTATATTCAGAACGAACATGCCACCGGGACCATTCATTTCTTCTAACCCG
AAGGTTATTGTTTTGCTCGATGGCAAGAGTTTCCCAGTCCTTTTCGATGTTTCGAAAGTC
GAAAAAAAGGACCTCTTCACCGGAACTTACATGCCGTCGACTGAACTCACCGGTGGTTAC
CGTGTTCTTTCTTATCTTGACCCATCTGAACCAAACCATGAAAAATTGAAAAAATTGATG
TTCTTCCTTCTTTCTTCTCGACGTGATCACGTTATACCCAAATTCCATGAAACTTATACA
GAGTTTTTTGAAACCCTAGATAAGGAAATGGCGGAAAAAGGTACAGCTGGTTTAAACTCC
GGCAATGATCAAGCTGCGTTTAATTTCTTAGCTAGATCGTTGTTCGGAGTTAACCCAGTT
GAAACTAAACTCGGAACTGATGGTCCGACATTGATCGGAAAATGGGTTTTGCTTCAGCTT
CATCCTGTACTCACTCTCGGTCTTCCGAAGTTTCTAGACGACTTAATCCTCCATACTTTC
CGGTTACCTCCGTTTCTGGTGAAGAAAGATTACCAGAGACTTTACGATTTCTTTTACACC
AACTCCGCCAGTTTATTCGCCGAAGCTGAAAAACTCGGCATTTCAAAAGAAGAAGCTTGT
CATAATCTTCTCTTCGCTACTTGCTTCAATTCCTTCGGCGGGATGAAGATTTTCTTCCCG
AATATGCTGAAATCGATAGCGAAAGCAGGGGTGGAGGTCCATACCCGTTTAGCAAACGAG
ATCCGATCGGAAGTAAAATCCGCTGGCGGGAAGATCACGATGTCGGCGATGGAGAAAATG
CCGTTAATGAAATCAGTAGTTTATGAAGCTTTACGAGTTGATCCTCCGGTAGCTTCACAA
TACGGAAGAGCCAAACAGGACCTTAAGATCGAATCACACGACGCCGTTTTCGAGGTGAAA
AAAGGTGAAATGCTATTCGGGTACCAACCATTTGCAACGAAGGATCCGAAAATTTTTGAC
CGGCCGGAAGAGTTCGTCGCCGATCGGTTCGTCGGAGAAGAAGGAGAAAAGTTATTGAAA
TATGTATTATGGTCTAATGGACCGGAAACGGAAAGTCCGACAGTGGGGAATAAACAGTGT
GCTGGCAAAGATTTTGTAGTGATGGTTTCGAGGTTATTCGTAACGGAGTTTTTTCTCCGT
TACGATACATTCAACGTCGACGTTGGTAAGTCGGCGTTGGGGGCTTCAATTACTATAACT
TCTTTGAAAAAAGCTTAGTTTTGGATCGAGGTCGGGAGTCGGATCGAGATCAAAATTTGG
TCTACAGTGCATGTGTTGCTTGTTCTTATAATTTCAGTAATTGTTTCGCAAAAGGGGTGA
ATTTTTGTTTGTTGTTTAGATTTGGGTTGTGTACATGTTTTTTTCCATCTAAATTGCTTT
TTTCTATCCCAAAATACTTGCTTGTTCTTT
