Microarray Probes on PGSC0003DMT400001180
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_18835_PI426222305 |
JHI_St_60k_v1 |
GGACCAAAGATTGAGGAAGTGGATTAGGAGTTTTTGAGTTGAATTGTTTTACTTGTTTGT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400001180
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400001180 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G02500.1 |
+3 |
0.0 |
1107 |
592/658 (90%) |
heat shock cognate protein 70-1 | chr5:554055-556334 REVERSE LENGTH=651 |
Transcript Sequence (2166 bp)
>PGSC0003DMT400001180 2166 pgsc_dm_v3.4
TACATTAAATCTCAAACATCACATTTCTTTCTTCTTTAATCATATTGTTTCTCTGTTTTT
CTGTGAGTGAAGTAAAGAAAAGAATGGCAGGAAAAGGTGAAGGGCCAGCAATTGGAATTG
ATTTGGGTACTACATATTCTTGTGTAGGTGTATGGCAACATGATCGTGTTGAAATTATAG
CGAATGATCAAGGCAACAGAACCACGCCCTCTTATGTTGCTTTTACTGATACTGAACGCC
TCATTGGTGATGCTGCCAAGAATCAAGTCGCTATGAACCCAGTTAACACTGTATTCGATG
CTAAGCGTTTAATTGGAAGGAGATTTAGTGATCCTTCAGTGCAAAGCGATATGAAACTAT
GGCCTTTTAAGGTTATACCCGGGCCTGCTGACAAGCCAATGATTGTTGTTACATACAAGG
GTGAGGAGAAGCAATTTTCTGCTGAGGAAATCTCATCCATGGTCTTAACCAAAATGAAGG
AGATTGCTGAGGCATACCTTGGGACAACAATCAAGAATGCGGTCGTCACAGTCCCTGCTT
ACTTCAATGATTCTCAGCGTCAGGCAACTAAGGATGCTGGTGTCATATCTGGTCTTAATG
TGATGCGTATAATCAACGAACCAACAGCTGCTGCAATTGCCTATGGACTTGACAAAAAGT
CTACTAGTACTGGTGAGAAAAATGTGTTGATTTTCGATTTAGGTGGTGGTACTTTTGATG
TGTCTCTTCTCACTATTGAAGAGGGGATCTTTGAGGTTAAAGCTACTGCTGGTGATACTC
ACTTGGGAGGTGAGGATTTTGATAATAGAATGGTGAATCATTTCGTTCAAGAGTTCAAGA
GGAAGCATAAGAAGGATATTAGTGGGAATCCGAGAGCGTTGAGGAGGTTAAGGACTGCTT
GTGAGAGAGCAAAGAGGACTTTATCATCCACTGCTCAAACTACAATTGAAATCGATTCCT
TGTATGAAGGGATTGACTTTTACACAACCATCACAAGGGCAAGATTCGAGGAGAAGAACA
TGGATTTGTTCAGGAAGTGTATGGAGCCTGTGGAGAAGTGTTTGAGAGATGCTAAGATGG
ATAAAAGCGGCGTTCATGATGTGGTTCTTGTTGGTGGATCAACTAGGATCCCGAAAGTTC
AACAATTACTTCAGGACTTTTTCAATGGGAAGGAGCTTTGTAAGAGTATCAACCCCGATG
AAGCAGTTGCTTATGGTGCAGCTGTGCAAGCTGCAATTTTGAGCGGTGAAGGCAACGAGA
AGGTTCAAGACTTGTTGCTGTTGGATGTCACTCCTCTGTCGCTCGGTTTAGAAACTGCTG
GAGGTGTAATGACTGTGTTGATTCCAAGGAATACAACCATTCCAACCAAGAAAGAGCAAG
TTTTCTCTACATACTCAGACAACCAACCCGGTGTCCTGATCCAGGTATACGAAGGAGAAA
GAGCGAGGACCAAGGACAACAACCTGTTAGGCAAGTTTGAACTCTCTGGCATCCCACCTG
CACCAAGGGGTGTTCCTCAAATCAATGTCTGCTTCGACATTGATGCCAATGGAATCCTGA
ATGTCTCCGCGGAGGACAAAACTACTGGACAGAAGAACAAGATAACTATCACCAACGACA
AGGGTCGACTATCCAAGGAAGAAATTGAGAGAATGGTGCAAGAAGCTGAGAAGTACAAGT
CTGAAGATGAAGAGCTCAAGAAAAAGGTGGAAGCTAAGAATGGATTGGAGAATTACGCTT
ACAACATGAGGAACACTATTAAAGATGACAAGGTTAGTTCCCAACTTCCAGCTGCTGATA
AGAAGAAGATTGAGGACGCGATCGATGAAGCTATCAAGTGGTTAGACAGTAACCAACTTG
CAGAAGCTGATGAGTTTGAAGACAAGATGAAGGAACTGGAAAGCGTATGCAATCCGATTA
TTGCCAAGATGTATCAAGGTGGTGCCGGTGGAGCTACTATGGATGAAGATGATGGTCCTT
CTGTTGGTGGTGGTGCAGGAAGTGGAAGTGGTGCTGGACCAAAGATTGAGGAAGTGGATT
AGGAGTTTTTGAGTTGAATTGTTTTACTTGTTTGTTACTAAGTAATCTTTGAATAGCCTT
TTGTAATGAAAGTTTGTTCATCCTTTTGTTGTTAATAAATTATGTGCTTTTCAATATAGA
ATTGAA
