Microarray Probes on PGSC0003DMT400000652

Probe IDChipProbe Sequence
CUST_3027_PI426222305 JHI_St_60k_v1 GTAGTAGCAAATTTTCCGTGACTGTCTATAGTAGTACACATTTTCTATCATAATCAAGGC

Link to Spud DB Genome Browser for Transcript PGSC0003DMT400000652

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Source Transcript PGSC0003DMT400000652 - Homology to Model Species (BLASTX to E-value < 1e-50)

DatabaseLink to BLAST HitFrameE-valueScore% IdentityDescription
Tomato (ITAG)None-----
TAIR PP10 AT1G01260.1 +2 0.0 538 315/627 (50%) basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr1:109595-111367 FORWARD LENGTH=590

Transcript Sequence (2671 bp)

>PGSC0003DMT400000652 2671 pgsc_dm_v3.4
ATACAGTTGGGATTTAGAACAAACCCAAAAACTTTGCCTCCCCTTAACTTCTCTCTCTTT
TACTTTGCAACAAAATAGAGAAAACATCATCTTTCATTTTTTTTTCCTGAGAAAACCACA
AATCTCTCTTTATTGAGGAAAAACTATAATAATTCTCCCAATTGAAAACATCAGTTTTGT
TTCAGAGCTCAAAAGTTTTGTTTGTTTCTGTTTCTTAACTGCAACTGCAGTGCAGAGTTA
CTGGTGTGTATTTTTTTTGCTGCTTTTAACCAATCTTTGTTTCTTTTTTTGTCCATATAT
GTGCATTTTTATGTCAAAGTTGTATCTTTTCTGGGTATTTTCTTATAGTTACTGATACCC
TTTAGATTTTCAAGCTTTTGAGATCTGAAATTTGAGGTATGGACGATTGGGAGTTCAATA
AAAAGAAGAAGATCAATTGTTTTGAATCAAGTTAAGATGGGTTTATTTTAGATTGGTTAA
TTGGTGTTGTAAAATGTGTTAAAGGTTGAAGCTTTGGAGAAAAAAAAAGAAAAAGAATTG
TCTTTTTAGTTCTTGTTTCATCTTAGGAATATAAAATTTGGAATCTTTTTTTTTTTTTTG
GGTGTTTTGTAGTTGAAGGGATTTTATTACTAGGTAGATAGATATGGTTACTGGGAATAT
GTTGTGGAGTGGTGAGGATAAAGCTACGGTGGCGGCTGTTTTAGGAAAGGAAGCTTTTGA
ATATTTGATGTCTGGCTCTGTTTCAGCAGAATGTTCTTTAATGGCAATAGGGAATGATCA
GAATTTGCAGAATAAGCTTTCAGATCTCGTGGAATGCCCAAACGCCGCTAACTTTAGCTG
GAATTATGCCATCTTTTGGCAAATTTCGCGGTCTAAGTCAGGGGAATTGGTTCTAGGGTG
GGGGGATGGGTGTTGCAGAGAGCCTAAGGAAGGAGAGGAGCGTGAAGTTAAAAGGATTTT
CAATCTACGCCTCGACGATGAGGGTCAACAAAGGATGAGGAAGAGGGTACTTCAAAAGTT
GCATATGTTATTTGGTGGAACAGATGAAGATAACTATGCTTTTGGATTAGATAGAGTTAC
TGATACTGAAATGTTCTTCCTTGCCTCGATGTATTTTTCGTTCCCTCGAGGAGAGGGAGG
TCCGGGGAAGTGTTTTGGATCAGGTAAGCATTTGTGGTTATCAGATGCATTGACATCTAA
TCTAGAGTATTGTGCTAGATCTTTCTTAGCTAAGTCTGCTGGTATGCAAACTATTGTTTT
GATTCCAACTGATGTAGGAGTTGTGGAATTGGGGTCAGTGAGATCAATTCCGGAAAGTTT
GGAGCTATTACAGAATATAAAATCTTGCTTCTCGTCGTTTTTGTCACTTGTTAGGGATAA
GCAAGCAGCAGGTATAGCAGTTGTACCTGAGAAAAAAGAGGGAAACAATCCCCGCCTTTC
CAACTCAGGCGCTGTTACTGAACGAACAGACGGAAATCCTAAGCTATTTGGGCATGATTT
GAATTCGGGCACTCACTTTAGGGAAAAACTTGCTGTTAGGAAAGCGGAGGAGAGGCCATG
GGAAAATGGTAACAGAATGCCATTTGTGAACGCACGGAATGGTTTAAATCCTGCTTCTTG
GGCTCAATTCAGTAATGTGAAGCCGGGAAAACCTGTGGAGCTCTATGGTCCTCCAACCCC
AGGACACAACCTAATCAATGGTGGAAGGGAAGAATTCCGCTTGAACAACTTTCAACATCA
AAAGCCAGCTGCTAGAATGCAAATTGATTTCACCGGAGCAACCTCGAGACCCATTGTTTC
GCCAGCACACACTGTTGAGTCTGAACATTCAGATGTTGAAGTTTCGTGCAAGGAAGACCG
TGGAGGCCCAGTGGATGAAAAGAGGCCTCGAAAACGTGGAAGAAAGCCAGCCAACGGAAG
GGAAGAGCCTCTCAATCATGTAGAGGCAGAGAGGCAGCGGAGGGAAAAATTGAACCAGCG
GTTCTATGCCTTACGAGCTGTTGTTCCGAATATCTCCAAGATGGACAAAGCTTCCCTCTT
AGGGGATGCCATTGCTTACATAACTGAGCTGCAGAAAAAACTTAGAGATATGGAATCTGA
GAGGGAAAACACTTCAAGGGATGCAATCGCTTCAGAAGACAGCCCGAGTTCAGAGATTCA
AATCCGAGGACCCAACATCAACATAGAAGCTGCCAATGATGAAGTCATTGTAAGGGTGAG
CTGCTCAATGGAAACCCATCCACTATCTCGAGTCATCCAAATATTCAAAGAGGCGCAAAT
CAACGTTGTTGAATCAAAACTTTCCGCGGGGAATGGTACTGTGTATCACACATTTGTCCT
CAAGTCTAGTGGATCTGAACAGCTGACTAAGGAAAAGTTGCTGGCTGCATTTTCCAGTGA
ATCAAACTCGTTAAGGCAACTTTCACCGGTAGGGCAATAGCAGTATCATGTTTTATATAT
ATATATATATATATATATACTCCAGTTGTTAGGGATATAAATGTAGTGAAGAATCCATAT
CGTAGTTTTTATTTTCTTTTCTGCAGAAAATTTCGTATACATCAGTTCAAGATAGGTGGA
AAATAACTATCTATTGACAAAGTAGTAGCAAATTTTCCGTGACTGTCTATAGTAGTACAC
ATTTTCTATCATAATCAAGGCTAAGATTAAT