Microarray Probes on PGSC0003DMT400000001
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_2829_PI426222305 |
JHI_St_60k_v1 |
ATGTGCTCAGGTAATCATCACCAGAAACATGCATCTTGTTTCAACCTTTTTTCCTGCTTA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400000001
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400000001 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G12600.1 |
+3 |
1e-97 |
275 |
135/167 (81%) |
UDP-N-acetylglucosamine (UAA) transporter family | chr1:4286414-4288859 REVERSE LENGTH=349 |
Transcript Sequence (2060 bp)
>PGSC0003DMT400000001 2060 pgsc_dm_v3.4
AATGCACTAAGTTTGTAACATATTGTGGAGATCTTTATCATTCATGATAGTAACTCATTT
ATATAATTGTTGTTTTCTAATGTCTCTACAATGTTGAATCTTTTTCTTGGGACCCCTTTG
TGGTCCATTTTGCAGAAGAATTCTCTTTACTGTTAGATAAAGAAATTGTTGTTTTCCAGC
TTTTGCCTGTGTTTTCACTTCAAGGGCCCTTTATTTTTTCCTTAATACGCAAGCGTAGCT
AGATGTTTATTACAGTTGTTTCTGGCTCCATGTTATTCCTGGTACTGGTACCAATTGACA
TTATATTGGACTTTACTAGTGCACTTGAGTATATTTCCTTTGTAAAGGTGAAGCTAATTT
TAGCTTTTCCAATGTCATGATTTAGAATTTGGTAAATGCTTTCGAATATCTAGTATGTTG
GGGGGCGAGAGCGTTGTAGAACATTACTCAGTTTTTCTTAGCTTATAAGCTATATACCGA
AGTATTTCTCTTTTGCAGTTAGAGTTACAAAGCATGTTCTGTATCTTTCATGATGAGAAT
GTTATGAATATGTCTGATTTTACCTTAATTTTCATGATCAATTACAGGAATATGTATATA
ATAGGCTTCAATTCAGCTATGGATGGTACTTTACCTTTGTTCAAGGATTGGTTTATGTGG
CTCTTATTCATTTCCTCAATGGTTTTACTCCTAAGCAAATGGTGAACCCGTGGAAGGATT
ATGTTAAGCTCTCTACCGTTCTCATGGGCTCACATGGGTTAACGAAAGGGTCTTTGGCTT
TCCTCAACTATCCAGCACAAATCATGTTCAAATCTGCCAAGGTATTGCCTGTCATGGTAA
TGGGGGCTTTCGTGCCCGGTCTGCGACGAAAATATCCACCCCATGAATATGTTTCGGCAG
TACTCTTGGTAGCAGGCCTGATTCTTTTCACTTTGGCTGATGCACAAACCTCGCCAAATT
TCAGCTTAATTGGTGTGCTAATGATATCTGGTGCTTTGGTTATGGATTCTTTTGTGGGGA
ATTATCAAGAGGCCATCTTCACGTCTAATCCTAACACAACACAGGTTTATTTAATGTGCT
TTTGCATTCAATATGATGCTTAATCACGAGAATACTCGTTCATGACAAACTTGTGACTAG
TTCACACCTTTAGGATTGTTTGTTTAACCTTTAACTTTAACAGATGGAGATGCTCTATTG
TTCAACAATTGTCGGCTTTCCTATCTTGTTTGTGGCTATGATTGTAACAGGAGAACTAAG
GATAGCATGGCCTGCATGTGCTCAGGTAATCATCACCAGAAACATGCATCTTGTTTCAAC
CTTTTTTCCTGCTTACCTTGTTTCTTTTTCTCCTGCAGCATCCCTATGTTTACGGAGTCT
TGGTGTTTGAAGCCTGCGCTACTTTCGTGGGGCAAGTGTCTGTCCTTTCCCTCGTAGCAA
TATTTGGTGCTGCCACTACTACAATGGTTTGTTTCTATTAAGACTTGTCCTTTAACGAAG
TTTCTTGATTATCTCATTATGACCGTGTGTATACATCTCCAACTTGAACTCGCATTTGCT
TGAATTTGTACAAATCATTAACTGCATTGACATTATCAGATTACAACTGCAAGGAAGGCT
GTAACATTATTGCTTTCATACTTGATATTCACAAAGCCTTTGACCGAACAACATGGTACT
GGATTGCTGTTGATGTGTATGTGCATCATAATGAAGATGTTGCCTGAAAACAAGCCCCCG
CATCCTAGGCCGCAGAAAATTATCCCTCTTCAACAAACTGAAAAACCTCGCGAGACTGAA
GATGACAGATTTCAGATAGGCATTGAAGAGGAAGAAGAGAAGAGACCTTTGGTCTAAAAC
AAAGTAGAGACTCTAGCTTAGTCTATTATTTCAATTTTGATTAGCTTTTATAGTTGTAAT
ATGGCAACAAAATGCTAGGCTCTTTTAAAAAAATATAATATATATATATACTTTATTGCT
ATTCATCCAAGGTGGTAAACATTTGTCAGATTTGTTTCTCTAAGGGCATTTAGTCCATCT
TTAGATGATGAATATGGATG
