Map Locations of contig_52137 (10984 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_52137

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_66806 7 3995 bp MLOC_66806.2 Available Available LOC_Os06g46284.2, FRAME:+1, EVALUE:0.0, 13106.m04887 protein glycosyl hydrolase, family 31, putative, expressed
MLOC_66807 1 172 bp None Available Available None





CDS Structure of MLOC_66806






CDS Structure of MLOC_66807






Contig Sequence (10984 bp)

>contig_52137 10984 assembly3_WGSMorex_rbca.fasta
ATAGGGATTGTCATCAATTACCAAAGTCACATATGGAGAAATATGCTCTAACACCAGGGA
TCAAGCCCTATCAAAATAACTTGATTACATGATCAATCTCATCCAGTCCCATTACCGTCT
AGCAAGCCTTCAAAGGAATTACTCACTCCCGGTGGTGAGCATCATAATGGTGTTGATGGA
GAAGGGTGGGTGATGACAACTGCGACAAATCCCCCTCTCTGGATCCCCAAACGGACTTCA
GATCAGTGCCCCCCTACCCCGAGGAAGAACATGAGGTGGCGGTGGTTCCATCTCATGAGA
CGTGATGAAATATTATTTCTTATTTTTTTTCTTTGGAAATAGGAATTTATAGGCCTCGAA
TTAGGGTCGACGGAGCAACAAGGTGGCGCCAAGCCAATAGGACTCGCCCAAGGGGGTGGT
CGCCCCCCGTTGGCTTGGCACCAATAGGTGGCCCCCTCTGGTGGGTCTTCGCTCCAATAA
TTTTTATATTGTCCAAAGAAACTCCAAAAAGTTTCGTCCAATTCTGAGAACTTTTATTTC
TGCACAACAAAAACACCATGGCAGTTTTGCTGAAAACAACGTTAGTCCCGGTTATTTTCA
TTCAATTCATGCAAATTAGACTTCAAAACTAGAGCAAAAGTGTTTGGAAAAGTAGATGTG
TTTGTGACGTATCAACTCCCCCAAGTTTAATGCATCGCTTGTACTCAAGCATTTAAGCTC
ACAAACTGAAAGTGATAAAGAAAACTTTGCAAACTCTTTTATTCTCGTTGTTGTATATAT
ACTTAGCTAGTGTTCAGGTTTTGAGCATAAAGATCATATATAATCATATCAATGATAACA
ATTAGACATTATATTCACTCATGGTAATAAGATAACCAACTAGCGAGAAGTAATAAAATA
TCTCATATGCCAACAATTTGTGAAAACAATCATGATGTAACATGATGATATGGTATCTTG
CCAACCCTTTTTGAGATTGCAAAACATAAATGCAGAGCACCTCTGAGGTTCAAGCAACGA
TTAAACATTGTAATTAGGAGTCGAAAACATCCAATCGTGCTCACACCCAACATTAACTAG
ACTCAATGCATAAGAATGACAATAGTGCTTTCGGGTCTGGTGCTTTTAGTAAGGAGACGA
TGACTCAAATAAAATAAAATAACATGAGAGTAAATAACATAAAAGTAAATAGAAAGACCC
TTCGCAGAGGGAAGCACCGGCTTGCAGAGGTGCGAGAGCTCATGGTTTTAAACTGAGATG
AATTTTAATTTTGGGTGGTGTGATTTTCCTGTCAATGTCACAACACAGATTTTCGTATCT
TCCATGCTAAACACATTATTGGCCATTCCCAAACATAAATATAAAGTTTACTCCCATCCA
TCATTCATACACAAGCCATGGCTGACCATCCTCGGATGTCCCCCAACATTTCAACTGTTC
CGCAAGTTTTGTTTAATTATTTTTTATTATGCTGGAGTGAGCATTCTTTTTACGAGCCTC
TCTTGTGCAATGAAAAATGGTGTACTGATGTTCCGCAAAAAATGAAAGTAATAGCTTGGA
AAGCTTCAGCGCGCACTATCTACAATGCTAGGTAAGGTGGAGCATCATATTGGTGTTCGT
GCTACATGTGTGATCTGTGGTATGGAGGATGGATCAAGTTTTCATATGCTCGTTACTTGT
TATCATGCACACGAGCTTTGGGAGCGTATGCGGGAGGTTTGGCCTCTCCCTCCGCTAGAG
CGACTACAACATTCAGAGAAGGATTGGCTTCTTTTATTATTGGATGGTTGTTCGGCAACT
ACTAGAAGCATGATTATTTTGTTAGTGTGGAGAATCTGGAATTTAAGGAATGATATAGTC
CATGATAAGGATGCTACTCCCACATACGTTTCGTTTGAATTTTTCCAAAGTTATCGACGG
TCCCTTGATAACGATCAAATACTCGTCTGAGGAGATACCAAAGGGAAAGATGCCTTTGAT
CAGTACTAATAACGCGTTCATTGTGCCGGTTTCGAAACTAGCCTTATGTTGGACACCACC
ACCACAGGGACAGTCTGCATTATCATTTGATGGTTCCTTCTCGACTGCAAATAGTACCGC
GGCGACATGTATGATCTTAAGGAGGTATGATGTAGTGTTATTTTTGCGGCATACATATTC
TTATTTCATTGCAATGATGCACTCGAGGCTGAGATCCACACGATAATGCAAGATATGGCT
GTTGCAATTCAACATACGGATCTACGTTCAATTTGACTCGTCCATGGCTCTATCTACACT
TGTTGATGACTACGTTGACCGTTCTGCATACGCTCATTTGACTTTGAAGATTAAAGCACT
TGTGGTTGATATGGAGTTTGTTCCATCAAAATTACATCGTGTTCAAAATAGAGTAGCAGA
TTGTTTGATAAGGTATAGTCGTTCTAAGTGTACTACATATGTGTGGTTACACAAATGGTC
TCATTTATCAAGGAAATTTTACCTCTAGACTGTAACTCTATTACTTTGAAATAAAACTCC
TTATTTTGTTGGGAAAAAAATACGGTTGTAGAGGTTCGGTTAGAAATGCCAGATCTATGA
ATGCACTAGGACTCATCGCAAGGTTACGTGCACGTCGAGTCAGAGAAAATGTGTGGCCTT
TGAAAAATCCATGCTGCCGTATACGCTCGAAATACGCACCTGCCTAGTATACTACGTAGT
ATATCTTACACGGACGATTGATTGAATGAACGAACGAATTAAGAAACGCACGCAGCGAGG
AGGGCGGGCCGGTCAGCGGGAGTCTGCGTACGTGCTCACCCCGCCCGTAGACCACTCGCC
GCTCGCCACCGTTGCGGCAAGTAACAGCCCACTGGGTCTTATCGCCGGCACCGGTCCCGA
TGCGTCGACCGCAGCCGCCGCCGACGGCTCTGGAAGGAAGGAAGACCCGTACCGCGCCAT
GCCGTTACCCCTGGGCGCGCGGTGCCGGGCAACGGCCGGATTCCATGATCTGCTCGCGTC
TCCCCCATGCCATGCCGTGATACCGAACCAACCGGCCAACCAAAGCGGCCACGATTGGTC
CATTTGGACGGCCGGCGATCCTATAAGTACAGGTGCCATCGCTCGCCGATCGACACAGCG
ACAAGCGCAAGACCGTCACACACACACACACACCAGCCCCATCCGATGGCGACGCGGTCG
CTGCTGCTGCTCTGCTTGTGTCTCTGCTTATTCGCGCCCCGCCTGTGCTCGTCCAAGGAG
GAGGGGCCGCTCGCCGCCGGCGGGTACCGTGTTAGCCGCGTCGCGGTGGACGATGGAGGG
CGGCGGCTGCGCGCCGAGGCAGCGGCCGCCACCGGCGGCGCGTCGTCCACCGGCGACGTG
CAGAGGCTCGCCGTGTACGCCAGGTGCGTTCAGACATCAAAGTTTTTTTTACGGGATTCC
AGACATAAAAGTTCAACGCATGCCGGAGCATTTTTTTTCTTCTGTACAAGACAAGCGTGG
TGTGGACCTCGCGTAGTGGTGAGAATCTAATCAGTAGTACGTACTGATCCGTGTCCAGTC
CGCGTGTCGGACTACTCGCGATCGAGCGTGACCACTTTCTTAGCCCAAGTCTACGAAGTT
GATTCTGATGCCCAGCAGTACATCACATGACAGCCACTAATGCTTTTGGTCCAAACCCAG
GACTAGCCACAGTGCAACGAAGACAGTCCAAACACTCGTGACTTGTGCTCTGCTCGAACC
GCACGGCACGCCGGTAGATGAGATGTCACGTACACGCGCGCATGGCCCATCGCCATCGGC
ATCAACGAATGATCACACGGCAAAAGGCAGCTACATGTAGTCGTAGTAGGAGTAGCCGAG
CAGATGATATGTCACGTACTACGTTGCATACGCGTACGTACCGTCGCCATCTTTTGGCCC
ATGCATGCATGCTCGGACAACCCTTGCCGTCCAATTCCAAAGGAAAGCCAACAAAATAAA
GGGTGGTGCAGATAAGGTGGTCACAAACTCACATCATGAGAGGTATATGCATGGTCCATA
TAGTTCCATACTATACACTGTTCCGGCCGGATTATGCTTTTGTCTTTCACCGGCCTTCTT
TCACGTCAATATTTGGCAAGTAGCTCTGTCCGGTACCGTGAAAAGAATGTATTTATGTGC
ATCAATATTTGATGTCACGCACAAAAATTTACTACATGTTTCGCACTCCATACAACTACA
GATGGAGTATTATGTAAAATAAATATTTGAGTCATATCACAGAAGACACCATAAATTAGA
AATTAGGTTGACTGTATATAATTTACTTCATCGCCTGGGAGAAAATTAAAAATCGATTCC
GTTAAAGTATTTTACATTGCTCATTGTTCTATTTTGGACTAGATATATGAAAGAAAGTGT
ACCCTCGAAAAAAGGGAATAAAGTGGAGCTTATAAACGGAAGGGGATGATCGACCAAGGA
CTCACCGAGTAGCAATTTATCAATACCACAAACCCTGATACTAACATAGATATACAAGTT
AATTGTGTATATATTCCTTCAATTTTAAGGATGGGATATCTACTTTTCAACCCTTGACAC
TTACTTCAACTTCCACTTTCATATATTTTACAATAAAAAACTGTTTTTTTTATTTTCTTT
ACTAATTCTTGAGAGAGAATCCAGCGAAGACGTTGAGATTGAAGCATAATTTTATCCTAC
ATACACTTCCATCCTATAGAAATTTTAAATTTTGTTTACATGCACCAATTAAATGACATT
TTTGGACCATCTCTATCCAAGTGGATGATGATTTCTTAAATTTCACTTGATTTAGATCAA
TGAAATTTCAGTAAAACTGTAACTTGGGCTTAGACCCAAATGCATTTTCCTCTCTTTTTA
AAGAAGTGCACTTTTTCCCCTTTTGAGTAAGCAAAGTTTCCCTTTTTAAAATCAATCGAG
ACAAATTTATGAGTTGAGTTAGAGGATAGTGGGAATTTAGACAAAAATATCCGCATTCAC
AATACCAAATTAATATCATTATATTTATCACCGAGTATATTTCTGTATTGTATTTATTTG
GTAATGTATATATTGATACTTTTAAATATAAATGTGTCAGTTTTCATAAAGTGTGACTTA
AGACAATCATAATATGTTTTTTTGCGTGCTCACAACCATAATATGTCGTGTAAAAAGGAA
AGGATGAAGTAGGTTCAAACAATGTAGCCCCATTTGTTTTTCTTCTGAAGCTACTACATA
TGCTTACAAAAGTACAATAAAATTCAGATTAAGTAATGAATATCATTTTTTAACTATAAT
GTGTATCATTTGTGTCCATAAAAATCGCCACCAGGGAACCAGTCCCACAACTACTGGCAA
GAAAATATGTACCATCTAGTAAACTGATATTTTTTATTTTCTTTATTAATTGTTGAGAGA
GAATCCAGCAAAGACGTTGAGATTGAATCGTTATCCTGCACACCCTTCCTTACTCTAGTG
ATTCTAAAAAAAATTATGTGTGCCAATTAAACGACATTTGGATCACCTCTATCCAAGTTG
ACCATGATTTTCTTAAATCTCATTTGATTTAGAAAAATGGAATTTTGGTGAGAATTGTGC
TTATAACCAATTGCATTTTTTCTCTTTATTTAAAGAAGTGCATTTTTTCCCTTTTGAGTA
AGCAAAGTTGCCGTTTTTAAAACCAGTTCAGACAAAATTATGAGTTGAGTTACACTAGAG
TGACAATTTAGTGGTAACCCCTCCGTTTTGTTTAATCAGCATATAGAATTTGTCTTACGT
CAACTTTTAAAAATTTGACCGAGTCTATAGATAAAAATATCATCATTCACAATACCAAAT
CAATATCATTATATTTATCATTGAGTACATTTTTTGTATTGTATCTATTTGGTATTGTAA
TTTCTAAATATTGATACTTTTAAACATAATGTGGTCAAATTTTATAAAGTTTGACATAAG
GCAACCTAATATGTTGTGTAAAAAGAAAAGGAGGAAATAGCTTCAAACAATGCAGCCCCA
TTTGATTTTGTTCTGAATCTACTATACATGCTTACAAAAGTAAAACAAAATTCAGTTTAA
GTAATGAATATCATTTGTGTCCACAAAAATCGCCACCAGTGAACCAGCCCTACAGCTACT
GGCAGGAAAATGGTATTGCACTGTTAGTATATTATAGATCCAACAACAACGCAAAGGCAC
AGATTAGTTATTGTTATCCGGATCTTTTATCTCTTGATTGACACGCTACGATGCTCCTGA
AACCACTGTAGCCAACAACTTGCACGTATATGATCTTGTCAGGAATCCATTTATAGAACG
GAGCAGATCCTCCTCCATTTCTTTTCCAAAACCGATCCAAATTATTGGCGCTATCATCGA
TCTGCGCAGACCGCGCTACTCAGTTCTGTCAGCGGATTAACTTTTTAGACGGTACAGCTA
GTAACTACCACTGCCTCTGTTTCTAAATATAAAGACGTTTTAGCAGCTTAAATTAAACCG
TCAATACGTCTTCGTATTTGGTACGCGCCTGTAGCAACTCGGCAGCCCTAACATTCATCC
AAACATGAGTAGCTAAACTGCGCGGTTAACATCAAGAGTTGATTTCATTTAGTCCACAAG
CCAATGTACGTTACAGAAATAAACACTGCAGATTTACGCTGCCCTCAAGCCTGCAAAGCC
AAAAGCTCACGGCCTTTTAGCTGATCATTACTACTCAATTATTACTTAGTTCAGGAAGCA
ATGTTAAATGAAGCACATCGTGTATCGTCTTCGGGATCTGCTAATAAACTGGTGGAAAGC
GCCGTGCTTTGTCAGTTCAGCTGTGCTGTATCCTTCCTCTGAAGAAACCAAGGATCGGAA
TATTTCTCTGGCAGACAAAATCGCATCCCTGTCCGACTGATTGATTGGCTGGTCATCGCC
ACTGCTTACTTATTCGCAGAGCCGGATCTGTCTTGCACATTATATTATATTAGCTGGCCC
GGCCGGCCTCCTTGCGCTGCGCCTGCACCGCACACCCGGTGCTCCCCTTCCCTGCGCGTG
CTCCGATGGCGACGCCGTCCGCGGCAGACAACTGTTGTCCACCCCTCGTGACCCTCCTCC
TCATCGTCCTCCTCCCCCTGGCCGTCGCCTTGCCCTCGGGCGATGGCTCCGGCGGCGGGG
GGTACGACGTCGTGTCGGTGACCCAGTCGGGGAGCGCTCTGTCGGCGCGGCTGGAGCTGG
CGCTTGCCGGCGAGACGCCGGCCGACGCGGCGCTCGGGCCTGGTGTCCAGAGGCTCCGCC
TCACTGCAAGGCAAGTGCTTCGTGGCTTGGGTTAATCTTCAACTCTCACTCTCGCCGGGA
GACGGGAGTAGGTAGCGTGACCAGTGATTACTTTGATCGTCCGTCCGGACTACTCGTTAG
GAGTAATTGCTGTTCCCCCAGAGAAATTTCTGAGTTCATTGGGTCGCCGACAGGCCGACG
TACAAGTTCCTATGATGAGGAAGATACAAAAAAAGGACTGTAGACTGTAGGGAGTGTACA
GGAAGAGCAAAAAAATTACAGTGACCGATCACACTGGGACTCGAACCCAGAATCTCCCGC
TCCGGAGGCGAGCGCCTTATCCATTAGGCCATGCGACCACTGTGATATCGGTTTTGTAAT
TCAGGTACTTGTTCATATACTTACCATTTCATTTGCCATGCCGATGGCAGCCTCGAGACG
GACAGCCGGCTGCGCGTGCGCATCACCGACGCCGACCACCCGCGATGGGAGGTGCCGCAA
GACATCATCCCGCGCCCCGCGCCGGCGGACGTCCTCCACGACGCGCCGCCCGCCTCCTCG
GCGCCACTCCAGGGCAGCCGCGTCCTGTCCGCCGCGGGCTCGGACCTCGTGCTCACCGTC
CACGCCTCCCCGTTCCGCTTCACCGTGTCCCGCCGCTCCACCGGCGACATCCTCTTCGAC
ACCGCCCCCGGCCTCGTCTTCAGGGACAAGTACCTGGAGGTGACGTCGGCGCTGCCGGCG
GGCCGTGCGTCGCTGTACGGGCTGGGCGAGCACACGAAGAGCTCGTTCCGGCTGCGGCAC
AACGACTCCTTCACGCTCTGGAACGCCGACATCGGCGCGTCCTACGTGGACGTCAACCTC
TACGGCTCGCACCCCTTCTACATGGACGTGCGGCCACCGGGGACCGCGCACGGCGTGCTC
CTGCTCAGCAGCAACGGCATGGACGTGCTCTACGGCGGGTCCTACGTCACCTACAAGGTC
ATCGGCGGCGTCCTCGACTTCTACTTCTTCGCCGGCCCCAACCCCCTCGCCGTCGTCGAC
CAGTACACCCAGCTCATCGGCCGCCCTGCCCCCATGCCGTACTGGTCCTTCGGTAAGGAG
CTGACATTGCATTCCTGCACTTACTTACACTAGTACTCTGTTTCTTGCATCTGTATGAGC
TGAACGGCCATGGCGAATGCTGGTTGCTTGCAGGGTTCCACCAGTGCCGGTACGGGTACC
TGAACGTGTCTGACCTGGAGCGTGTGGTGGCCGGCTACGCCAAGGCCAGGATCCCGCTGG
AGGTGATGTGGACCGATATCGACTACATGGACGGGTTCAAGGACTTCACCTTGGACCGTG
TCAACTTCACCGCCGCCGAGCTCCGGCCGTTCGTCGACCGGCTTCACCGGAACGCCCAGA
AATACGTCCTCATCCTAGACCCAGGTACATACATACACACGACACCATCGAGATCGATCG
ATCAAATGTAGCAGCAAAATGGAACTTGATTTATTTGATGACGATGACAGGGATCCGCAT
CGACGCGACGTACGGGACGTTCGTCCGCGGGATGCAGCAGGACATCTTCCTGAAGCGGAA
CGGCACAAACTTCGTCGGCAACGTGTGGCCGGGCGACGTCTACTTCCCGGACTTCATGCA
CCCGCGCGCCGCCGAGTTCTGGGCGCGGGAGATCTCCCTCTTCCGCCGGACCATCCCCGT
CGACGGGCTGTGGATCGACATGAACGAGATCTCCAACTTCTACAACCCGGAGCCGATGAA
CGCGCTCGACGACCCGCCGTACCGGATCAACAACGACGGCACGGGCCGCCCCATCAACAA
CAAGACGGTGCCGGCCTCCGCCGTGCACTACGGCGGCGTCACCGAGTACGACGCGCACAA
CCTCTTCGGCCTCCTCGAGGCCCGCGCCACGCACCGCGCGCTGCTGAGGGACACCGGCCG
CCGCCCCTTCGTGCTCAGCAGGTCCACCTTCGTCGGCTCCGGCCGGTACACCGCTCACTG
GACTGGCGACAACGCCGCCACGTGGGGCGACCTGCGCTACTCCATCAACACCATGCTCAG
CTTCGGCCTCTTCGGCATGCCCATGATCGGCGCCGACATCTGCGGCTTCAACGGCAACAC
GACAGAGGAGCTCTGCGGTCGGTGGATCCAGCTCGGCGCCTTCTACCCCTTCTCGAGGGA
CCACTCGGCGATCTTCACCGTCCGGCGAGAGTTGTACCTGTGGCCGTCGGTGGCGGCGTC
GGCGAGGAAGGCGCTCGGGCTCCGGTACCAGCTGCTCCCTTACTTCTACACGCTCATGTA
CGAGGCGCACATGACGGGGGCGCCCATCGCGCGGCCGCTCTTCTTCTCCTACCCGCACGA
CGTCGCCACGTACGGCGTGGACAGACAGTTCCTGCTCGGCCGCGGCGTGCTCGTTTCGCC
GGTGCTCGAGCCGGGCGCCACAACCGTCGACGCCTACTTCCCGGCGGGCCGGTGGTACAG
CCTCTACGACTACTCCCTCGCCGTCGCCACGCGGACCGGCAAGCACGTCACGCTCCCGGC
GCCGGCCGACACGGTGAACGTGCACGTGGCCGGCGGCACCATCCTGCCGCTGCAGCAGAG
CGCGCTGACTACGTCGCGCGCGCGCCGGACCGCGTTCCACCTCCTGGTCGCGCTCGCGGA
GGACGGCACGGCCAGCGGGGACCTTTTCCTGGACGACGGCGAGTCGCCGGAGATGGGCGG
GAGAAGCGATTGGAGCATGGTAAGGTTCAGCTGCGAGATGGGGAGCGACGGGGCCATCAA
GGTGAAGTCGGAGGTGGTGCACAACTCGTACGCACAGAGCAGGACACTGGTGATAAGCAA
GGTGGTGCTCATGGGGCACCGGTCGCCGGCGGCGCCGAAGAAGCTCACCGTCCACGTCAA
CAGCGCGGAGGTGGAGGCGAGCTCGTCAGCCGGCACACGGTACCAGAACGCAGGAGGACT
CGGCGGCGTCGCTCACATCGGCGGGCTGTCGCTGGTCGTCGGGGAGGAGTTCGAACTGAA
GGTCGCCATGTCCTATTAAAATTTAGGCAATTTGTGATATGGACCATAACATTGATTGAA
TAAAGGCGAGAAATTAAAGCCAGATGAATGGCTTCGAATATGAGGGTGGAATGGCATGAT
TGTTTAGCTAGTTCATGAATAATTAATGATTTGACGTTGAACGGCTCTCATTATGAGGGT
GGAGTACTCAAGATGTACATTGACTAGCGTACGTGAAGCAATTATCGTATCACAAAATGG
TTAGTTGTGTATCATGGCAAAGAAGTTAAACATTGCTTTCTTGAAAAATGAAATTCACTT
AAGAGTGACTTTTCTGCAATAGAGATCGCCATTGCTGCACTCAGCCGTCCACCACCATTG
CGGAAAGAATTTCTGCCACTCGCTCGAGCAAACCTTAGTGAAGTATATTTACTATACTAA
CTTTTGGTTGGACCTAACTGATCCCCTAAATATAACGGTGTCAAATCTTGTTTTTTTGAA
CTTATGCAATTATAAATTACATTGCAACTAAATATTAACACACATATACGTAGATACTAA
TCATAAATATGAAGGAGGTGTTTGTTTCATCTTTTTTTGCCCCGCATCCGTTTACAGTGT
AAACAGATACCTTTACCCATGTTTGGTAATAACACACTGTAATCAACTTCCACCGTAATC
AGATCCAGGCCAGTTATCCCTCGTTGCCCCCCACCCCCCACCGGTAACGCGCGTTACCTC
CTCA