GMAP Utility

You can compare one sequence at a time. Please enter a single sequence in FASTA format.

Please note that this utility is intended to map transcripts to the genome and that very long sequences may cause the server to time out. If so please contact us - we will be able to provide results for longer sequences or sets of sequences (contacts: Miriam Schreiber, Linda Milne).

Paste your FASTA format transcript sequence here:

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>Example_of_FASTA
AGTGGCCTGATCACTTCAGCCTGTAGCTAGCAACACCTCTCTCTCTCTCTCTCTCTCTTG
CCACAATAATTCCGCATGGTGGGGATGAGCGGCGCCTACGGCGGCCACCACGGCAATGGC
GGCGAGGGCCGGGCGGCTCCCAAGCAGGCCGTGGTAGTCGGTGCGCCACCACCGCCGGCA
GCGGCCGAGATGGAGATGGAGATTGGGGTGGTGCACAAGGTGGCGGCGCAGCCGGCGCAG
AGCACGGCGAGCAAGATGAAGGGGAAGGTGAAGGAGACCTTCTTCCCCGACGACCCGTTC
CGGAGCTTCAAGGGGCAGCCGGTGCGGGCGCAGTGGGTGCTGGCGGCCAAGTACCTGTTC
CCCGTGCTGGAGTGGGTGCCCGGCTACTCCCTCTCCCTCTTCAAGTCCGACCTCGTCGCC
GGCCTCACCATTGCCAGCCTCGCCATCCCCCAGGCATGTGCATGCCCGACTTCGTCTCTT
TTCTCACGCACGTAATAACGCATCCAAATGCGATTTCTATCTATCTAGCCTGTATTGATT
TGGAGGCTAGCCTGTGCGCGATCAATCAGTCTCCGCGTACCAACAAACCCGTGACCAACC
GTGCTGATGTGCTTTTTTGTGTTGTTGCTGGCAGGGTATTAGCTACGCCAAGCTTGCCAA
CCTGCCGCCGATCATAGGCCTATGTACGTACATACATGCTTTCCGTTTCTACAGCGTACT
GTACCATATTTATGTAGTCGTATGTGCAAATAAATAATGAACTGGTATGGATGGATGCAT
GTTTGCAGATTCGAGCTTCGTGCCGCCGCTGGTGTACGCGGTGCTGGGGAGCTCGAGGGA
CCTGGCGGTGGGGCCGGTGTCGATCGCGTCGCTGATCATGGGGTCGATGCTGCGGCAGGC
GGTGAGCCCGTCGGCGTCGCCGGCGCTGTTCCTGCAGCTGGCCTTCACGTCCACCTTCTT
CGCGGGGCTGGTGCAGGCGTCGCTCGGCATCCTCCGCCTGGGATTCATCATCGACTTCCT
CTCCAAGGCGACGCTGGTGGGGTTCATGGCCGGCGCCGCCATCATCGTCTCGCTCCAGCA
GCTCAAGGCCCTGCTCGGCATCGTCCACTTCACCACCCAGATGGGCATCGTCCCCGTCAT
GGCCTCCGTCTTCCAACACACCAACGAGGTCCGTCCGTTCGTCCATGGCGTTCAATTATA
CACGTGCACACGTACGGTGCATGCTTGGCTAACATAATGTTTTGTGTGTGCGTGCGTGCA
GTGGTCGTGGCAGACGATACTGATGGGGGCATGCTTCCTGGTGCTCCTGCTAGCGGCCAG