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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_9456_PI390587928Hv_44K_v2CTGTCATGCCTTTATGATTATTAGAAGGTTGCCCTGCATCCTTACATTTTTATTTTGCAA488GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_55124.16202e-23493 - 55010058 / 58plus ABC00024 ABC28292 ABC42869
JLOC1JLOC1_35540.16121e-23471 - 52810058 / 58plus
Harvest21ABC010065033e-25428 - 48710060 / 60plus
Harvest21ABC282925052e-22424 - 4819857 / 58plusABC28292
Harvest35U35_10885753e-25489 - 54810060 / 60plus



Contig Sequence (575 bp)

>U35_1088 575 Hv_44K_v2
GGGGGAAGCTGCCTGCCTATAGAAAACCCGGCGCCCACGCGACCCGACCTCCTCATTCTA
GCCAGGCGCGAGCAAAGGTAGGGTTTACAGTTCCCAACTTCCAAGCCTCGCCGCCGCCGC
CGCCGCCGCCATGGGACACTCGAACGTCTGGAACTCGCACCCCAAGAACTACGGCCCCGG
ATCCAGGGTTTGCCGTGTCTGCGGCAACTCGCATGGCCTGATCCGCAAGTACGGGCTGAT
GTGCTGCAGGCAGTGCTTCCGCAGCAACGCCAAGGACATCGGCTTCATCAAGTACCGTTA
AGAATGGAAACCTCAAAGGAAGCAAGGACTAGGAAATTATCATCGAACTGCGGTGCTTCA
TCGAGGCCGATCTTTATTATCCTATAAACTATGTAATGAACTACTGTTAATGTTTGAATT
GGAGTGACAAATCCGTGAAACCATGTTGGTGACTGCTGTTTGAGCATCTGAAACCCGTAA
TTCTGTTACTGTCATGCCTTTATGATTATTAGAAGGTTGCCCTGCATCCTTACATTTTTA
TTTTGCAAAAAAAAAAAAAAAAAATGCTTTGTTTT



Homology of Contig U35_1088 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None