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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_8084_PI390587928Hv_44K_v2CATTGCGTTTTGTGGTTGATTTGTTAGCAATAAAAGAGCGATGCAATCTTGCGGAAAAAA2114GeneList: None
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.7441.1461.4041.3260.8470.793
Raw 28073.56763140.23371383.60099570.66723508.70024073.867



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK250051.121803e-212127 - 218010054 / 54plus ABC03391 ABC04970 ABC39054 ABC39160
MLOCAK251544.123023e-212249 - 230210054 / 54plus ABC03391 ABC04970 ABC39054 ABC39160
JLOC1JLOC1_112.113355e-22937 - 99110055 / 55plus
Harvest21ABC0339123103e-252107 - 216610060 / 60plusABC03391
Harvest35U35_1524523273e-252115 - 217410060 / 60plus



Contig Sequence (2327 bp)

>U35_15245 2327 Hv_44K_v2
CCCCCCCTCCGATCTGTGCTGTGTGGTCCGCTGCGCAGTGCCCAGAGCTCGCCATCCCCG
TGACTCGCGGCCTCCCGCCGCACGCCGCCGCCTCGCCCGGCCGTCGTCACCGTGGTAAAC
TGACTGGTCTATATATACAGTCGGTGGTGATCGGTACCAGACACAGTGCCAAGATGGGGA
ACTTGCACAAGACCACCTTTGTTCTCCTCATGTTCTGCTTGGCGGCGTTGGGAAGCGCGG
ATTATCTCAAGTACAAGGATCCGAAGCAGCCTCTTGGCGTTCGCATCAAGGATCTGCTTG
GTCGGATGACTCTCGCTGAAAAGATAGGCCAGATGACCCAGATCGAGAGGGAGAATGCCA
CGGCAGAGGCCATGTCCAAGTACTTCATAGGTAGCGTACTGAGTGGTGGAGGCAGTGTGC
CTTCTCCTCAAGCATCCGCTGCGGCTTGGCAGTCGATGGTGAATGAAATGCAAAAGGGCG
CCCTTTCTACCCGCCTAGGCATTCCGATGATCTACGGTATTGATGCTGTGCACGGTCACA
ACAACGTGTACAAAGCTACCATCTTCCCACATAATGTTGGCCTCGGTGCTACCAGGGACC
CTATGTTGGTAAAGAGGATAGGAGAAGCAACTGCTCTTGAAGTTAGAGCAACAGGAATTC
CTTACGCTTTTGCTCCGTGTATTGCGGTGTGTAGAGACCCAAGATGGGGACGCTGCTATG
AAAGCTACAGCGAAGACCCAAAGGTTGTCCAGTCAATGACCACACTCATCTCTGGTCTGC
AAGGTGACGTTCCGGCTGGTTCTGAGGGAAGGCCATACGTTGGTGGAAGTAAGAAGGTTG
CTGCATGCGCAAAGCACTATGTTGGTGATGGTGGTACGTTTATGGGGATCAACGAGAACG
ATACAATCATTGACGCCCATGGGCTGATGACTATCCATATGCCTGCTTATTACAATTCTA
TCATCAGAGGTGTCTCCACTGTTATGACCTCGTACTCTAGCTGGAACGGCAAGAAAATGC
ACGCCAACCATTTCCTTGTCACTGATTTTCTGAAGAACAAGCTCAAATTTCGGGGTTTCG
TGATTTCAGACTGGCAAGGCATTGATCGGATTACTAGCCCTCCAGGCGTGAACTATTCTT
ATTCAGTTGAGGCTGGAGTTGGTGCCGGTATTGACATGATCATGGTTCCTTTTGCCTACA
CAGAATTCATTGATGATCTGACATACCAAGTTAAGAACAACATCATCCCCATGAGCAGAA
TCAACGATGCTGTCTACAGGATTCTCAGGGTGAAGTTCACCATGGGTCTATTTGAGAGCC
CCTATGCTGACCCAAGCCTCGTTGGTGAACTCGGGAAGCAGGAACACCGCGATCTTGCTC
GTGAGGCCGTCAGGAAGTCATTGGTGTTGCTGAAAAATGGAAAATCTGCCTCCACTCCAT
TGTTGCCTCTCCCAAAGAAGGCCGGTAAGATCCTCGTCGCTGGAAGCCACGCTGACGACT
TGGGCAACCAGTGCGGAGGATGGACCATCACATGGCAAGGACAGACCGGCAACGACAAAA
CTGCCGGGACGACGATCCTTTCGGCGATCAAGTCCACCGTCGACCCCAGCACGGAGGTGG
TCTTCTCAGAGAACCCTGACAGCGCCGCCGTTGACAGCGGCAAGTACGACTACGCCATCG
TGGTGGTCGGCGAGCCACCGTACGCTGAGACGTTCGGCGACAACCTGAACCTGACGATCC
CTGCGCCCGGCCCCTCGGTGATCCAGAACGTGTGCAAGAGCGTCAGGTGCGTGGTGGTGC
TCATCTCCGGCAGGCCGCTGGTGGTGGAGCCGTACATCAGCGCCATGGACGCGTTCGTCG
CCGCGTGGCTGCCCGGCTCGGAGGGCCAGGGCGTGGCCGACGTGCTGTTCGGCGACTACG
GGTTCTCCGGGAAGCTGGCGCGGACGTGGTTCAAGTCGGCGGACCAGCTGCCGATGAACG
TCGGCGACAAGCACTACGACCCGCTCTTCCCCTTCGGGTTCGGCCTCACCACCGAGGCCA
AGAAGTGAGTCGGGTGAGATGGGATGTGTCTCGATCGGTTGGGCTGTGACTGTGAGAGAT
GGGATACATACATACATTGCGTTTTGTGGTTGATTTGTTAGCAATAAAAGAGCGATGCAA
TCTTGCGGAAAAAAAAAAAAAAAAAGTGTTGGTTCTGTTGTGCAACAAAATCTAGCAATT
GTGTTCTCTTGTAAAAAAAAAAAAAAAAAAGTACACGAGAGGCAACGCCCCTGCTCCGAT
AAAAATTTGAAAACCGTACTATCGACAATTAAAAAAAAAAAAAAAAA



Homology of Contig U35_15245 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os03g53800.46260.0protein|periplasmic beta-glucosidase precursor, putative, expressed
Brachypodium v1_2Bradi1g08570.26250.0
Arabidopsis v10AT5G20950.16240.0Glycosyl hydrolase family protein | chr5:7107609-7110775 REVERSE LENGTH=624