Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_7392_PI390587928Hv_44K_v2TGCACATTGTTATTAGTTGCTCCTCTGTTTGGGAATATATAGGATCTTGACAGCAAGACA0GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK252530.114189e-221228 - 12899760 / 62plus ABC07624 ABC07625
JLOC1JLOC1_48289.213045e-221051 - 11129760 / 62plus
JLOC1JLOC1_48289.113415e-221088 - 11499760 / 62plus
Harvest21ABC0762415183e-251459 - 151810060 / 60plusABC07624
Harvest21ABC076257392e-22143 - 2049760 / 62minusABC07625
Harvest35U35_479706593e-251 - 6010060 / 60minus
Harvest35U35_1713417422e-221539 - 16009760 / 62plus



Contig Sequence (659 bp)

>U35_47970 659 Hv_44K_v2
TGTCTTGCTGTCAAGATCCTATATATTCCCAAACAGAGGAGCAACTAATAACAATGTGCA
CGGCAAAGCATCACCATCAACACGATGATTCCATGAATTTTATACTTGCTGCAATTAAAA
TATATTATCATGCCATAATCAGATCGGTCTCCAATGCCGGGATATGCTCCCTGTTGGCCA
GGGAGATCTGTCCACCACCATGATCCTCCTTTCGGTGGAGCACATGATCCTCCTTGTCTC
CATGCCTCTCTGTCCATCTGTCTCCATGCCTATCGTCGTGGGAGCACATGCGGCCATGTT
AAAATCACCACTAGGCTCTGTACTCGTCGCCGCAGTCCCCGATGACCTCCATCAGGTTCC
GGCCCCGCTGCGACGCCTCGGCGATGCTGCCCATGTCCTCCTCGTCCAGCAGCAGCGACA
GGATCGCGTTGGTGTCCCTGATGTGCTCCGACAGCCCCAGCCTCACGCCCACCATCGAGC
CCGCCACCGATGTCTGGTTCAGTATGTATCTTACGGCGACGGTCGAGATTGGGACGCCGT
GTTTCAGCGACACCTTCTTCAAGGTCTGGAGCAGAGCCTGGAACAGGCTCCAGCCACCCC
AAGCATCGATCATTCTCTTGTACTTCTGCAGGGATGGGGTGTTCAGAGGAGGTGCAGCG



Homology of Contig U35_47970 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os09g39390.13865e-65protein|oxidoreductase, aldo/keto reductase family protein, putative, expressed
Brachypodium v1_2Bradi4g38440.13853e-67
Arabidopsis v10AT2G27680.13845e-52NAD(P)-linked oxidoreductase superfamily protein | chr2:11803981-11805965 REVERSE LENGTH=384