barSeed - Barley Seed Development Database

Probe ABC07624

Source Contig ABC07624

barSeed

Links

Affymetrix Source Sequence (1518 bp)

>ABC07624 1518
CAGAAGAGCCTTATCTCTCTCGCGCGCGCGCTCGTACCGCCATGTCGCCGTCGTCAGCGG
CCCGCGCCCTCTCGCCGGCGCCGGCGCCGCCCCCGCCCCAGCGTAAGATCCGCCTGCGGC
CAGCGAGGTGCGCGGGGTTCGTGGGCCCGGCGGTGGAGACGGCGACCCCGGGGCCAAGGG
CGGCGACCCTCGCCAGCAGCCGCGGCGGGACCGAGTCGTCGCTGGCCATCTGCCGGGTGC
TCAACGGCATGTGGCAGACCAGCGGCGGGTGGGGCCGCATCGACCGCGCCGACGCCGTCG
ACGCCATGCTCGCCTACGCCGACGCCGGCCTCTCCACCTTCGACATGGCCGACCACTATG
GACCGGCGGAGGATTTATACGGCATGTTCATCAACAAAGTCCGGCGCGAGCGCCCGCCCG
AGATGCTGGAACAAGTCAGGGGGCTTACGAAGTGGGTGCCGCCGCCGGTTAAGATGACAA
GAAGCTACGTTGAGGAGAACATCAACAGGTCCCGGAAGAGGATGGACGTCGCTGCCCTGG
ACATGCTGCAGTTCCATTGGTGGGACTACGCAAATCCCGGATATCTAGATGCACTAAAGC
ACATCACAGACCTGAAGGAGGAAGGCAAGATAAAGACTGTAGCTCTGACGAACTTCGACA
CAGAGAGGCTGCAAATAATCCTAGAAAATGGAATACCTATTGTCAGCAACCAGGTTCAAC
ATTCTATTGTGGATATGCGCCCGCAGAAAAAGATGGCAGAGCTTTGCGAGCTTACCGGAG
TCAAGCTTATCACGTACGGCACGGTGATGGGTGGCCTATTGTCTGAGAAGTTCCTCGACA
CCAACATCAACATACCTTTCGCTGCACCTCCTCTGAACACCCCATCCCTGCAGAAGTACA
AGAGAATGATCGATGCTTGGGGTGGCTGGAGCCTGTTCCAGGCTCTGCTCCAGACCTTGA
AGAAGGTGTCGCTGAAACACGGCGTCCCAATCTCGACCGTCGCCGTAAGATACATACTGA
ACCAGACATCGGTGGCGGGCTCGATGGTGGGCGTGAGGCTGGGGCTGTCGGAGCACATCA
GGGACACCAACGCGATCCTGTCGCTGCTGCTGGACGAGGAGGACATGGGCAGCATCGCCG
AGGCGTCGCAGCGGGGCCGGAACCTGATGGAGGTCATCGGGGACTGCGGCGACGAGTACA
GAGCCTAGTGGTGATTTTAACATGGCCGCATGTGCTCCCACGACGATAGGCATGGAGACA
GATGGACAGAGAGGCATGGAGACAAGGAGGATCATGTGCTCCACCGAAAGGAGGATCATG
GTGGTGGACAGATCTCCCTGGCCAACAGGGAGCATATCCCGGCATTGGAGACCGATCTGA
TTATGGCATGATAATATATTTTAATTGCAGCAAGTATAAAATTCATGGAATCATCGTGTT
GATGGTGATGCTTTGCCGTGCACATTGTTATTAGTTGCTCCTCTGTTTGGGAATATATAG
GATCTTGACAGCAAGACA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK361271	1619	4e-134	1353 - 1619	99	265 / 267	None	ABC07624 ABC07625
MLOC_72596.1	1002	0.0	1 - 853	100	853 / 853	None	ABC07624 ABC07625
MLOC_72596.2	1097	3e-76	1 - 156	100	156 / 156	None	ABC07624 ABC07625
MLOC_72596.3	820	8e-57	1 - 121	100	121 / 121	None	ABC07624 ABC07625
AK252530.1	1418	2e-133	2 - 266	99	263 / 265	CUST_36015_PI390587928 CUST_7392_PI390587928	ABC07624 ABC07625
MLOC_55181.3	966	0.0	525 - 964	100	440 / 440	None	ABC07624
MLOC_33601.1	183	8e-77	2 - 182	96	173 / 181	None	ABC07624
MLOC_49861.1	165	1e-69	1 - 162	96	156 / 162	None	ABC07624
MLOC_55181.2	2099	3e-66	1885 - 2099	88	192 / 217	CUST_27038_PI390587928	ABC02943 ABC02946 ABC07624
MLOC_32353.1	144	1e-59	1 - 144	96	138 / 144	None	ABC07624
MLOC_1991.1	128	2e-58	1 - 127	99	126 / 127	None	ABC07624
MLOC_47611.1	145	8e-57	1 - 142	95	135 / 142	None	ABC07624