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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_6620_PI390587928Hv_44K_v2GTTTGCATTACGATAAAATTCTGTCCTTGAACGTGTCATCCCATGAAAGAGATGTATATT792GeneList: None
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.9740.8130.7200.5881.3451.198
Raw 3.4873.4102.6913.6053.0933.211



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_60443.110662e-2440 - 9910060 / 60minus ABC01159 ABC01179 ABC01185
JLOC1JLOC1_39412.210598e-25821 - 88010060 / 60plus
JLOC1JLOC1_39412.110488e-25810 - 86910060 / 60plus
Harvest21ABC011599183e-25798 - 85710060 / 60plusABC01159
Harvest35U35_166149133e-25793 - 85210060 / 60plus



Contig Sequence (913 bp)

>U35_16614 913 Hv_44K_v2
ATTTCCTTCAACAATATGGCTCTCCTCAAGAACTTGGCCGCGTACCTGTGCGTGATCCTG
GCCTCGCTCGCCTTCGTGGCGCAGGGCGCGCTCGCAGCCAGAGCAGGTGCTTTAAGCAAC
GTGAGGGGGTACACGGTTAAGGACCCGCGCGGTGGTGGTGGTTATGGGAATGGGTATCCT
CCATGATAGGCCGGAGATGATGACACTTGGACCACGGAAATACTACAAATAAGTCCGCGT
ACCATGAATAAATTTGCACACGTTGCCGATATATAGTAAAACACAGTGATGCACGGTTTT
ACTCCCTCTATACGTGAATAATTACAGTTGAAACGAACTAGTCTAGTTTTCCTCAACTAT
AATTATTTAGCTACAGAGAAAGTATATTGTTACTACATACTATGCTTGGCTTTCTAAATA
AATGCCTTGTGGCGGCTTGTGAGCTTACGGCGTGTCTCGTCTGAGTTTGGCCGACGCCGA
GTCTGTTCGGGTCGCGCCCTAACAGGTCGTCAAGTCTCTGCATGAACCGAGTCGTTATAC
AACAAGATGCAGAATGCATTGGTCATAGCGATTTTCGGCTGCGAGGTCACTACCTTGTAC
CTTGAACGAATAATAGAAGGAGAAGAAAAGCTGTGAAAAGTTTACGCGGTGCACATCTCT
TCACTCTTGTGGGCCGTGCTCTCTCTTGCGAGGAATTATACTGGTTGCAAGGAATTGTTG
TCTCACACAAGCGGAACCTTTTAGTTCTATAGATTTTCATGCTCTACGTGCAAATATAAT
TTTTGTCATAGAGTTTGCATTACGATAAAATTCTGTCCTTGAACGTGTCATCCCATGAAA
GAGATGTATATTGGTTTCAAAGAATGTGAAGCGATATACATATCACTCCTCACACTAAAA
AAAAAAAAAAAAA



Homology of Contig U35_16614 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None