- Probe CUST_636_PI390587928
- Source Contig U35_14077
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_636_PI390587928 | Hv_44K_v2 | ATCTGTTATCTGTCTGTTTGAATGTTTGCTTTGTGGTGTTTGTTTTACAACCTGTTGTGT | 511 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| MLOC | MLOC_7079.1 | 1740 | 2e-24 | 1675 - 1734 | 100 | 60 / 60 | plus | ABC00127 ABC00333 ABC00803 ABC00902 ABC48258 ABC50944 ABC52601 |
| JLOC1 | JLOC1_4669.1 | 2053 | 8e-25 | 1679 - 1738 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC00803 | 695 | 3e-25 | 512 - 571 | 100 | 60 / 60 | plus | ABC00803 |
| Harvest21 | ABC00333 | 1756 | 3e-25 | 1529 - 1588 | 100 | 60 / 60 | plus | ABC00333 |
| Harvest21 | ABC00325 | 224 | 3e-25 | 75 - 134 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC00279 | 552 | 3e-25 | 423 - 482 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_38626 | 292 | 3e-25 | 163 - 222 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_14084 | 1745 | 3e-25 | 1554 - 1613 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_14077 | 572 | 3e-25 | 512 - 571 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_14075 | 552 | 3e-25 | 423 - 482 | 100 | 60 / 60 | plus |
Contig Sequence (572 bp)
>U35_14077 572 Hv_44K_v2 TATCAGCAGAGAAGGCTTACCATGAGCAGCTGTCTGTTGCCGAGATCACCAACAGTGCAT TCGAGCCTTCCTCCATGATGGCCAAGTGTGACCCCCGCCATGGCAAGTACATGGCCTGCT GTCTCATGTACCGTGGGGATGTCGTGCCCAAGGACGTCAACGCTGCTGTGGCCACCATCA AGACCAAGCGCACTATCCAGTTTGTTGACTGGTGCCCCACTGGCTTCAAGTGCGGTATCA ACTACCAGCCACCTGGTGTCGTCCCAGGGGGCGACCTTGCCAAGGTCCAGAGGGCTGTGT GCATGATCTCCAACTCCACCAGTGTTGTTGAGGTCTTCTCCCGCATCGACCACAAGTTTG ACCTTGCTGCCCTGGAGAAGGACTATGAAGAAGTTGGTGCTGAGTTCGACGATGGTGAGG ATGGTGACGAGGGTGATGAGTACTAGAGCCTGCCTCCTGGTGCTTTCCCAAGGCGTACTA CTGCTATCCTATGATCTGCCCAAGCGGCTTTATCTGTTATCTGTCTGTTTGAATGTTTGC TTTGTGGTGTTTGTTTTACAACCTGTTGTGTT
Homology of Contig U35_14077 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | LOC_Os03g51600.2 | 434 | 7e-80 | protein|tubulin/FtsZ domain containing protein, putative, expressed |
| Brachypodium v1_2 | Bradi1g10150.1 | 452 | 7e-81 | |
| Arabidopsis v10 | AT4G14960.2 | 450 | 2e-78 | | Symbols: TUA6 | Tubulin/FtsZ family protein | chr4:8548769-8550319 REVERSE LENGTH=450 |