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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_5898_PI390587928Hv_44K_v2CCGAAATTCGGAATGAACTCAAAGTTGGCATGTGCAAGTGCGTGCAATATTCTCAGGAAA572GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK250890.19562e-23880 - 93710058 / 58plus ABC20148
MLOCMLOC_15668.413902e-23926 - 98310058 / 58plus ABC16646 ABC20148
MLOCMLOC_15669.29772e-23342 - 39910058 / 58plus ABC20148
MLOCMLOC_15668.130862e-23854 - 91110058 / 58plus ABC20148
MLOCMLOC_15668.312532e-23764 - 82110058 / 58plus ABC20148
MLOCMLOC_15668.236202e-231388 - 144510058 / 58plus ABC16646 ABC20148
MLOCMLOC_15669.112382e-23397 - 45410058 / 58plus ABC20148
JLOC1JLOC1_10758.211131e-23918 - 97510058 / 58plus
JLOC1JLOC1_10758.19491e-23499 - 55610058 / 58plus
Harvest21ABC201486383e-25573 - 63210060 / 60plusABC20148
Harvest35U35_92266383e-25573 - 63210060 / 60plus
Harvest35U35_274538144e-24736 - 79310058 / 58plus



Contig Sequence (638 bp)

>U35_9226 638 Hv_44K_v2
GCACGAGGCCCCTCTGCACTGTCAATGTTCCTAGCCGGCTTAGGTGCCTCTGGTTGTATG
ATAAATCAATGGCAACATATCGGCAGCGATGGCCCTGATAAGGGGGAGTGCGGCGGCGTC
CAGATGCTTCTCCGATTCGGTCGGCACAGTCAACCCCGAGGCCCTGGTTGGACAAATAGT
GGGACACGCCGATCAGGAAGTGTTCAAGACAATAACAAGCAGTTACTACTTACTAGCGGG
GAGTTCATGGAATCACTTTTCTTTGAAGTGGCGGCGAGGAAGCAGCCCTCGATTGGGGCC
ATGGTGCTCTGTCGGCGGGCTAGGAACAGCGGCGACTAGGGACTAGCCAAACTCTAGCAC
CAGAATGGGCGGTGGCGGGGAAGGAGCAGTGGTTTCCGGGGTACTTGGGGGAAAGGAGGA
AGAAGCAGAGGAGGATTGATTAGCAGGGGATTTTAAATCACAAGGTTGTTTTTGCAAAAC
AACAAATGAACTAAGTCTTGGATATTCTTTTTCGGACGAAGGGAGTATAAGTATTTGTTA
TGCCCTGTTGTGCCATGGTGATTTATGTATAACCGAAATTCGGAATGAACTCAAAGTTGG
CATGTGCAAGTGCGTGCAATATTCTCAGGAAAAAAAAA



Homology of Contig U35_9226 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None