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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_5217_PI390587928Hv_44K_v2ATATCACCGTTGTTAGTGTTCCTGGCAGCTTTGAAATTCCTGTTGCAGCACAGAAGCTTG575GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK35996415392e-24540 - 59910060 / 60plus ABC00262 ABC00398
MLOCAK37064721832e-241594 - 165310060 / 60plus ABC00262 ABC00398 ABC00501 ABC00927
MLOCAK36567511232e-24372 - 43110060 / 60plus ABC00262 ABC00398
Harvest21ABC0044512023e-25568 - 62710060 / 60minus
Harvest21ABC0039811993e-25593 - 65210060 / 60plusABC00398
Harvest21ABC0026210293e-25385 - 44410060 / 60plusABC00262
Harvest35U35_1374312333e-25593 - 65210060 / 60plus
Harvest35U35_1373910823e-25427 - 48610060 / 60plus
Harvest35U35_137356433e-25576 - 63510060 / 60plus



Contig Sequence (643 bp)

>U35_13735 643 Hv_44K_v2
GGACAGAACAAGCGGCGGCAGCGACGGCGATTGGATCGAGCGCTAGGACGGCGATTCCGA
CGCAACGGAGCTTGGACGGGAGATAGTGGCCTAAGGGGAGACACTCTTTTGCATCCTATC
TGTTTGGAACTCTTCTGAAGGTGAAAAGGCAACACATCTTTGACATCCCCACGACCGGAC
TTGAGCAGCCGCAGGCCGCAGCAGACAGATCTTCTCGACACCCACCGACGGCTAAGCGGA
TATGGCGGCTTCACCGGCAACGTCGTCCGCGGCCGCGGGGGCCTCCTCCTCCGCGTGGCT
ATCCAGCGCGCCTCTGCGTTCGCCCAGAGTCGCCGCTGCCTCGTTCCCGTCGCCCAACTC
CGTTCGTCCGGCCGCGCTGGTCGTGGATGCTCGGGCCTCTCGGCTCTCCGTCGTGACCGC
AGCCGCCGCAGGGCACCAGCGGCTGATGGGGTCGCTGACCAACAACGAGGGGCTCAGGTT
CGGCGTGGTTGTGGCACGGTTCAATGAGATAGTGACCAACTTGCTTCTGCAGGGGGCTCT
AGAGGCATTCGAGCGATACTCCGTCAAAGCAGAAAATATCACCGTTGTTAGTGTTCCTGG
CAGCTTTGAAATTCCTGTTGCAGCACAGAAGCTTGGGAAGTCT



Homology of Contig U35_13735 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2Bradi1g10780.12213e-55
Arabidopsis v10None