barSeed - Barley Seed Development Database

Probe ABC00927

Source Contig ABC00927

barSeed

Links

Affymetrix Source Sequence (1007 bp)

>ABC00927 1007
ACAACTCCCCTCTCGACAGAACAAGCGGCGGCAGCGACGGCGATTGGATCGAGCGCTAGG
ACGGCGATTCCGACGCAACGGAGCTTGGACGGGAGATAGTGGCCTAAGGGGAGACACTCT
TTTGCATCCTATCTGTTTGGAACTCTTCTGAAGGATTGTATCGGAGCTATTGATGGTACA
CATGTACGAGCCTCTGTAACAAAGGACATGGAGCCTTCCTTTCGTGGTAGAAAGATCCCT
ACAACTCAAAATGTGATGGCAGCCGTTGATTCTGATCTTCGGTTTACGTATGTATTGGCT
GGTTGGGAGGGGTCAGCACACGATGCGCTAGTCTTACATGATGCGTTAACCCGTCCAAAT
GGTCTTCGTGTACCATAAGGAAAATTTTATCTAGCTGATGCTGGATATGGAGCCAAGCCA
GGGTTCTTGCCCCCTTTTCGTGGAGTGAGATACCATTTGAATGAGTGGGGGAACAATCCT
CCTATAAATGAGAAGGAGTTGTTTAATCTTTGGCATTCTTCTCTTCGCACGACCGTAGAA
CGTGGATTTGGGTAATCTTACCACCTCAAACAAATTGGTGAGTGCAACAATCATCCCCTC
TTCAATCCTCTCAACCAAACACACAAATGGCTATCCCTAGTCACCTCTATCCTCCCTACC
AAACAAAATAATGCGGTTATCCAACTCATCTAATCCCTTGTAACCAAACAACAAAAAATG
GCTATCCCCAGCCACCTGGTATCCTCACCCGTGAACCAAACGCCACCTTAGCCAGCTTTT
GAAGGAATATTCCTAGGTATCTGTTTATCCCCACCCTACTTTACCATCAAACCAAACGAG
TGGCATCTTTCCTAAAACTGACTATCCCTATCCACTGGTTGGTTATCCCTCAAACCAAAC
ACCACCTAAATAGCGGGCCGGGACGAGGGTTCCTCTCTCATCCGCACGCTAACTCGTTGC
ACAAGAATTTCCTCCCACCCCCACCGTCTCGCCGCCGCCGCCGCCAG

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK370647	2183	0.0	2 - 1008	100	1007 / 1007	CUST_5201_PI390587928 CUST_14524_PI390587928 CUST_5217_PI390587928	ABC00262 ABC00398 ABC00501 ABC00927
MLOC_33074.4	1679	0.0	1 - 490	100	490 / 490	CUST_14524_PI390587928	ABC00262 ABC00398 ABC00501 ABC00927
MLOC_33074.5	1669	0.0	1 - 490	100	490 / 490	CUST_14524_PI390587928	ABC00262 ABC00398 ABC00501 ABC00927
MLOC_33074.3	177	2e-75	23 - 176	100	154 / 154	None	ABC00927
MLOC_33074.1	1215	2e-75	27 - 180	100	154 / 154	None	ABC00262 ABC00398 ABC00927
MLOC_33074.2	1225	8e-75	27 - 179	100	153 / 153	None	ABC00262 ABC00398 ABC00927
MLOC_80771.1	519	8e-65	361 - 519	95	151 / 159	None	ABC00927