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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_4876_PI390587928Hv_44K_v2GTGCTCCATCAGTGAGAATCTGAACTTGTTACGTTAACTCGTTAAGAACTGTTTTCTTAT19GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_22184.161942e-242463 - 252210060 / 60plus ABC12425 ABC15227 ABC33324 ABC38132
MLOCMLOC_22183.227452e-241664 - 172310060 / 60plus ABC38132
MLOCMLOC_22183.325832e-241855 - 191410060 / 60plus ABC12425 ABC38132
MLOCMLOC_22183.120262e-241258 - 131710060 / 60plus ABC12425 ABC38132
JLOC1JLOC1_15379.343588e-253554 - 361310060 / 60minus
JLOC1JLOC1_15379.238718e-253067 - 312610060 / 60minus
JLOC1JLOC1_15379.138508e-253046 - 310510060 / 60minus
JLOC1JLOC1_15378.218288e-251176 - 123510060 / 60plus
Harvest21ABC381326163e-2520 - 7910060 / 60minusABC38132
Harvest35U35_424556163e-2520 - 7910060 / 60minus



Contig Sequence (616 bp)

>U35_42455 616 Hv_44K_v2
TTTTTTTTTTTTTTTTTGAATAAGAAAACAGTTCTTAACGAGTTAACGTAACAAGTTCAG
ATTCTCACTGATGGAGCACATTCAAAAAGAAATGACGACAACTAGAGTTTGAGCCACAGA
ATTAGGGGCGAATGAGTAACTCTGTCTTCTTTCTTTTCTTAAAACAAAGGTCAGCCTGGT
TAATGTAGCTCCCGCTTGCGCAGGGTGCGGGAAAGGGTCCGACCACTTTGGGTCTATTGT
ACGCAGCCTTTCCCTACATTTCTGCAAGAGGCTGTTTCCAGGACTTGAACCTGTGACCTC
ATGGTCACAAAGCAGCAGCTTTCTTTTCTTAACCAAATAGAAATAGTTAGCATTTAACTA
CCATAGTAAGCAGCTGCATAAATACATTACACATTCACAACAAACAAATCTCAGTTGCAG
AGCATTCATTTCAATTCTCTCAACCCTCAGGATAACATGGTATGCTTGGACATTAACCAC
CTTCCCACCTCAGATCTGTATAGCATCATCCACCCCTTAATAATTTGCCAGGTCAGTAAA
CTATGCAGATTTCCGAAGTAGCCAGGACAAAATGTATGAAAGGGCAGCGTCAACGGAAGA
CAAGGCAACAATGAAC



Homology of Contig U35_42455 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None