- Probe CUST_4466_PI390587928
- Source Contig U35_49629
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_4466_PI390587928 | Hv_44K_v2 | GCTAAATAACCTAATGATTCAGCTGAGGAAGAACTGTGCCCATCCTGATCTTTTCAATGC | 576 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| MLOC | MLOC_61395.2 | 1962 | 2e-24 | 113 - 172 | 100 | 60 / 60 | minus | ABC08894 |
| MLOC | MLOC_61395.1 | 1837 | 2e-24 | 113 - 172 | 100 | 60 / 60 | minus | ABC08894 |
| MLOC | MLOC_61395.3 | 1914 | 2e-24 | 113 - 172 | 100 | 60 / 60 | minus | ABC08894 |
| JLOC1 | JLOC1_40120.18 | 4209 | 8e-25 | 1690 - 1749 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_40120.17 | 4363 | 8e-25 | 1844 - 1903 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_40120.16 | 4382 | 8e-25 | 1863 - 1922 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_40120.15 | 4213 | 8e-25 | 1660 - 1719 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_40120.14 | 4157 | 8e-25 | 1638 - 1697 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_40120.13 | 4113 | 8e-25 | 1594 - 1653 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_40120.12 | 4421 | 8e-25 | 1902 - 1961 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_40120.11 | 4414 | 8e-25 | 1861 - 1920 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_40120.10 | 4187 | 8e-25 | 1668 - 1727 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_40120.9 | 4434 | 8e-25 | 1881 - 1940 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_40120.8 | 4191 | 8e-25 | 1638 - 1697 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_40120.7 | 4268 | 8e-25 | 1715 - 1774 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_40120.6 | 4411 | 8e-25 | 1858 - 1917 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_40120.5 | 4428 | 8e-25 | 1875 - 1934 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_40120.4 | 3935 | 8e-25 | 1416 - 1475 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_40120.3 | 3879 | 8e-25 | 1360 - 1419 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_40120.2 | 4080 | 8e-25 | 1527 - 1586 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_40120.1 | 2817 | 8e-25 | 264 - 323 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC51461 | 639 | 3e-25 | 577 - 636 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_49629 | 639 | 3e-25 | 577 - 636 | 100 | 60 / 60 | plus |
Contig Sequence (639 bp)
>U35_49629 639 Hv_44K_v2 GTCTAACCCTTATGTTATGTACAGATATGCCATGTCTGCCAATTTATTAAATATTAGCAG AATTTTATGTTGCACCTTTTCTTATTTATTACGCTTTCTGTTGTTAAACTTGTTATGTTA TGTTAACTGAAATGCGTGCTATGAATAAGTAATTTTGGAAGTAAGTAGATGGATTTTAAT ACCTTCCCATTAGGAGTTTTCGTTATAAAGATAGTGCAGTTACTATTTAAACATTCAGTG AATATATTTGGTGTATTTTGCCTCCATTATTCTGAAGAAATCTTCTTAAAGGTTTGATTT TTCTGGGAAAGGAGACGAGGAACAGCAGGAAGAAGCTGATGAGAAGAAAAGAGTCCTTGT TGTTTCAAAGCTTCATGCCATTTTGCGTCCATTCCTTTTAAGACGGATGAAGGTGGATGT GGAACAGATGCTTCCACGGAAGAAAGAGATAATCATTTATGCTAACCTGACTGCACATCA GAAGCAAATCCAGAGTCACTTGATTGAAAAGACATTTGACAACTACTTGTTTGAGAGCAC AGACATAGTGTTGCGAAGACCTGGCATGAAGATGAAGCTAAATAACCTAATGATTCAGCT GAGGAAGAACTGTGCCCATCCTGATCTTTTCAATGCTGC
Homology of Contig U35_49629 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |