- Probe CUST_4432_PI390587928
- Source Contig U35_37662
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_4432_PI390587928 | Hv_44K_v2 | ATGCCATGAACAAGCTCCAGACCAAGAAGCCTTGGAACCTGTCCTTCTCCTTCGGGCGTG | 480 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| MLOC | MLOC_73299.2 | 1210 | 2e-24 | 751 - 810 | 100 | 60 / 60 | plus | ABC00410 ABC00417 ABC00940 ABC00976 ABC31967 |
| MLOC | MLOC_73299.1 | 1497 | 2e-24 | 1016 - 1075 | 100 | 60 / 60 | plus | ABC00410 ABC00417 ABC00940 ABC00976 ABC31967 |
| JLOC1 | JLOC1_48789.1 | 1788 | 8e-25 | 1023 - 1082 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC47236 | 752 | 3e-25 | 162 - 221 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC00990 | 1395 | 3e-25 | 447 - 506 | 100 | 60 / 60 | minus | |
| Harvest21 | ABC00940 | 679 | 3e-25 | 455 - 514 | 100 | 60 / 60 | minus | ABC00940 |
| Harvest21 | ABC00354 | 1433 | 3e-25 | 902 - 961 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC00410 | 1799 | 6e-22 | 1281 - 1340 | 97 | 58 / 60 | plus | ABC00410 |
| Harvest35 | U35_46741 | 752 | 3e-25 | 162 - 221 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_37662 | 730 | 3e-25 | 481 - 540 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_14099 | 1474 | 3e-25 | 928 - 987 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_14102 | 783 | 6e-22 | 265 - 324 | 97 | 58 / 60 | plus |
Contig Sequence (730 bp)
>U35_37662 730 Hv_44K_v2 CCCAACTCCAAATCTCCATTTGCAGCCCTCGAATCTACCCCCCTCCCCGAGCATCGACCA TGTCGGCCTACTGCGGAAAGTACAAGGATGAGCTCATCAAGAACGCTGCCTACATTGGCA CCCCTGGAAAGGGTATCCTTGCTGCTGACGAGTCCACCGGCACCATCGGCAAGCGCTTCG CCAGCATCAATGTTGAGAACGTCGAGGACAACCGCCGTGCCCTCCGTGAGCTCCTCTTCT GCACCCCTGGTGCCCTCCAGTACCTCAGCGGTGTGATCCTCTTCGAGGAGACCCTCTACC AGAGCACCAAGGGTGGCAAGCCCAACATGGTCACCCCTGGTTCTGATGCCAAGAAGGTGA CCCCTGAGGTCATTGCTGAGTACACCGTCCGCACCCTCCAGAGGACCGTCCCTGCTGCCG TCCCCGCCATCGTCTTCCTCTCCGGTGGACAGAGCGAGGAGGAGGCGACTCTGAACCTGA ATGCCATGAACAAGCTCCAGACCAAGAAGCCTTGGAACCTGTCCTTCTCCTTCGGGCGTG CCCTCCAGCAGAGCACCCTCAAGGCCTGGTCCGGCAAGACTGAGAACGAGGAGAAGGCCA GGGCTGCGTTCCTGGTGAGGTGCAGGCCAACTCTGAGGCCACCTCGGCACTTACAGGGCG ACGCCACCTTGGCGAGGGCGCTCCGAGAGCTTCACGTCAGGACTACAGTACTGATGATCT GCGTTGGGTT
Homology of Contig U35_37662 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | LOC_Os05g33380.1 | 359 | 1e-59 | protein|fructose-bisphospate aldolase isozyme, putative, expressed |
| Brachypodium v1_2 | Bradi2g58050.1 | 359 | 2e-59 | |
| Arabidopsis v10 | AT2G36460.1 | 358 | 1e-52 | Aldolase superfamily protein | chr2:15296929-15298387 REVERSE LENGTH=358 |