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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_42070_PI390587928Hv_44K_v2GAAATCGGAAGAAGCATAGTTTTTGGAGTAATGAAGCCCTTTAAGTTGATCCTATTTGTA144GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK37580818903e-21673 - 7329758 / 60minus ABC00003 ABC00255 ABC06549 ABC34401 ABC42046
MLOCMLOC_63762.27983e-21588 - 6479758 / 60plus ABC06549 ABC42046
MLOCMLOC_63762.120313e-21233 - 2929758 / 60minus ABC00122 ABC06549 ABC42046
MLOCMLOC_63762.39243e-21106 - 1659758 / 60minus ABC06549 ABC42046
MLOCMLOC_63761.18013e-21106 - 1659758 / 60minus ABC06549 ABC42046
JLOC1JLOC1_41804.19212e-21652 - 7119758 / 60plus
Harvest21ABC420462783e-25145 - 20410060 / 60minusABC42046
Harvest21ABC065498506e-22623 - 6829758 / 60plusABC06549
Harvest35U35_443862783e-25145 - 20410060 / 60minus
Harvest35U35_137938506e-22623 - 6829758 / 60plus
Harvest35U35_1367413356e-221158 - 12179758 / 60plus



Contig Sequence (278 bp)

>U35_44386 278 Hv_44K_v2
TTTTTTTTTTTTTTTTACAACAAGTAAGCAATATAATTCTGCTACATCATATAACGCATA
TACAAATGTGATCAACATGAAGTTTACAATCAGATAACAACAAGAAGCAATCTTCTCTAC
AAGTTTACAATCATATTACATAAATACAAATAGGATCAACTTAAAGGGCTTCATTACTCC
AAAAACTATGCTTCTTCCGATTTCTTTGTCCTGATGCTCACGAAGAAACATGAAACGCCA
ACATTGATGGGGTGCAAAGCATTGACCGGCGGGTTGCA



Homology of Contig U35_44386 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None