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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_41662_PI390587928Hv_44K_v2ATTCCAGATATGTTGCTCTGAACATACTTATGAGGGCCATTACAGTAGATACACAAGCAG73GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK36807315352e-24751 - 81010060 / 60plus ABC15629
MLOCMLOC_27377.25722e-2435 - 9410060 / 60minus ABC15629
MLOCMLOC_27377.14442e-2435 - 9410060 / 60minus ABC15629
MLOCMLOC_27378.14622e-2435 - 9410060 / 60minus ABC15629
MLOCMLOC_3354.12147e-2386 - 1459859 / 60plus None
MLOCMLOC_3354.29187e-2375 - 1349859 / 60plus None
MLOCMLOC_1297.221469e-22159 - 21310055 / 55plus ABC20393
MLOCMLOC_1297.123749e-22371 - 42510055 / 55plus ABC20393
JLOC1JLOC1_18493.26918e-25402 - 46110060 / 60plus
JLOC1JLOC1_18493.16838e-25394 - 45310060 / 60plus
JLOC1JLOC1_795.122645e-22256 - 31010055 / 55plus
Harvest21ABC328185253e-2574 - 13310060 / 60plus
Harvest35U35_371525253e-2574 - 13310060 / 60plus



Contig Sequence (525 bp)

>U35_37152 525 Hv_44K_v2
GGAGCAGGGTCACTATGCAAGGCGGTGGCCTGCGGGAAGGGGAACTGCGTGGTGACAGAA
GTATGTCGGAAGGATTCCAGATATGTTGCTCTGAACATACTTATGAGGGCCATTACAGTA
GATACACAAGCAGTACAGAGGCACAGGGTGTCAATATTGGAGTGTGTAAAGGATGCCGAT
GCCTCCATTCGCAAAAGGGCCCTGGAACTTGTTTATTTGTTGGTCAATGATACCAATGTA
AAGCTACTGACCAAAGAGCTTGTCGACTACTTGCAAGTAGCTGATCCAGACTTCAAAGAA
GATCTCACAGCCAAGATATGCTCCATAGCTAAAAAGTTTTCTCAAGAAAAGTTATGGTAG
CTTGATAAGATGTTCAAGGTTTTATCCCTGAGTTGGCATACGCTGAAAGAAACACTTTGA
GAAGAAGACAAATTATACTCTCGTTACTAACACTGACATTTCGTTGGAAGAGATTTTGTT
CTCGGTGATTGGGCATAGTGATTTTGATGCATCGCCTGATCTCAT



Homology of Contig U35_37152 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os02g56110.28892e-53protein|AP-1 complex subunit gamma-1, putative, expressed
Brachypodium v1_2Bradi3g54597.18868e-55
Arabidopsis v10None