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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_40448_PI390587928Hv_44K_v2TTTGGATGCCAAGATATGCTGATTGGTGCAATCAGAAACCAGGTTCTGAATGAGTTCGCT76GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK35792621342e-241645 - 170410060 / 60plus ABC26079 ABC26631 ABC35374 ABC49958
MLOCMLOC_59859.617572e-241607 - 166610060 / 60plus ABC26079 ABC26631 ABC35374 ABC49958
MLOCMLOC_59859.419492e-241531 - 159010060 / 60plus ABC26079 ABC26631 ABC35374 ABC49958
JLOC1JLOC1_38986.119628e-251466 - 152510060 / 60plus
Harvest21ABC266315763e-2574 - 13310060 / 60plusABC26631
Harvest35U35_232335793e-2577 - 13610060 / 60plus



Contig Sequence (579 bp)

>U35_23233 579 Hv_44K_v2
GAGGCTCAACTCCTGTACAAATCTACACGCAGAGCGGCTGCTACTTCAGTGCCCAAACTT
GAAGAATGTACATGCATTTGGATGCCAAGATATGCTGATTGGTGCAATCAGAAACCAGGT
TCTGAATGAGTTCGCTGCAGCTGAACCACATCTTCCATGCAAGCGGCTAGCAGATGGTTC
GAAGCGGGTTCAACTCTCACAGTTCCCACAAGAGCAGTTACCGGAGGACAAAATATGGAT
TGGATTCAAGCGGTCAGAGTGCATTGTTCATCTTGATTCTTGATTAATAACAATAATCAC
ATGACCATAGCTAGAGAACTGCTCATTATGCGCACTCTAATTTGTGAAATTAGACGATGG
CGAGTATTTATTCATTTGTTTTGTGCACCTCCAAACCCATAATATATGTAATGTGCTTGT
TGTATAAGCTGCTACATGGAAGTGAAACTTTGCATCAACTGGCTTTGGGTATCCATCGGC
GTACTCCGTTTGGCCTAATTGATATGTAGTCATATTCCATAATATTCATTTTGGTGCAAT
AAAGTTGCGAATCATTTAGACTAAAAAAAAAAAAAAAAA



Homology of Contig U35_23233 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None