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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_39541_PI390587928Hv_44K_v2AGTGCTTATGGTTTTTGCCTTTATTTTGGTTAGTCTTCTCCATAAACGTCTGAAGCAAAT413GeneList: None
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.9420.9851.1750.6761.3021.159
Raw 3.5016.3888.9916.0593.7183.430



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_71313.318369e-221280 - 13379857 / 58plus ABC07811 ABC09965 ABC43005 ABC47240
MLOCMLOC_71313.418349e-221278 - 13359857 / 58plus ABC07811 ABC09965 ABC43005 ABC47240
Harvest21ABC181656763e-25414 - 47310060 / 60plus
Harvest35U35_88936763e-25414 - 47310060 / 60plus



Contig Sequence (676 bp)

>U35_8893 676 Hv_44K_v2
ATCCATACAATCCCCAGGACAATTTGGTTAGACAGCGAGGGCAAACACTTGCTGCAATGG
CCAGTTGATGAGACCGAGTTGCTTCGAACAAATGAAACCAACCATCAAGGACTAGAGCTC
AACAAGGGTGATCTGTTTGAGATCAAGGGAGTTGACCCTTTTCAGGCTGATGTGGAGATA
TATTTTGAGCTGACATCCATCAATGACGCCGATCCTTTTGATCCTTCCTGGCTTTTGTAC
CCCGAGACGCATTGCTTCAAAGCTGGTGCATCGGTTCCTGGTGGTATAGGGCCATTTGGA
CTAGTTATTTTGGCCTCCAACAACATGGATGAGCACACTGCCGTGCACTTCAGAGTCTAC
AAGTCACAGCAAAAGTACATGATACTCATGTGCTCTGATCTAAGAAGGCCAGTAGTGCTT
ATGGTTTTTGCCTTTATTTTGGTTAGTCTTCTCCATAAACGTCTGAAGCAAATTGAAATA
TTTTCTTTTCTTTGCACAGGTCTTCCATGAGACCAGGACTGTGCACACCAGCCTATGGAG
GCTTCTTTGAATTTGATCTTGAAAAGGAACGGAAGATATCTCTGAGAACTCTGATTGATC
GGTCGGCGGTGGAGAGCTATGGCGGGGGTGGCAGGGTCTGCATCACAGCCAGAGTTTATC
CAGTGGTGCTCGCTGT



Homology of Contig U35_8893 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os01g73580.15136e-83protein|glycosyl hydrolases, putative, expressed
Brachypodium v1_2Bradi2g61830.15822e-82
Arabidopsis v10None