- Probe CUST_39318_PI390587928
- Source Contig U35_46024
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_39318_PI390587928 | Hv_44K_v2 | TACGACGACCTCCAGAACCGCATCGGCGGCGGGAAGCCCAAGATGCGATGGTACTTTGGA | 359 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| MLOC | AK357752 | 1263 | 2e-24 | 412 - 471 | 100 | 60 / 60 | plus | ABC23996 |
| MLOC | MLOC_38606.2 | 1412 | 2e-24 | 215 - 274 | 100 | 60 / 60 | plus | ABC23996 |
| MLOC | MLOC_38606.1 | 1015 | 2e-24 | 215 - 274 | 100 | 60 / 60 | plus | ABC23996 |
| MLOC | MLOC_38606.3 | 1278 | 2e-24 | 215 - 274 | 100 | 60 / 60 | plus | ABC23996 |
| MLOC | MLOC_38606.4 | 881 | 2e-24 | 215 - 274 | 100 | 60 / 60 | plus | ABC23996 |
| MLOC | MLOC_38606.5 | 1192 | 2e-24 | 211 - 270 | 100 | 60 / 60 | plus | ABC23996 |
| MLOC | MLOC_38606.8 | 1739 | 2e-24 | 198 - 257 | 100 | 60 / 60 | plus | ABC23996 ABC45547 |
| MLOC | MLOC_38606.9 | 1238 | 2e-24 | 198 - 257 | 100 | 60 / 60 | plus | ABC23996 ABC45547 |
| MLOC | MLOC_38606.6 | 1300 | 2e-24 | 209 - 268 | 100 | 60 / 60 | plus | ABC23996 ABC45547 |
| MLOC | MLOC_38606.7 | 1249 | 2e-24 | 205 - 264 | 100 | 60 / 60 | plus | ABC23996 |
| JLOC1 | JLOC1_25121.4 | 1808 | 8e-25 | 183 - 242 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_25121.3 | 1327 | 8e-25 | 203 - 262 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_25121.2 | 1226 | 8e-25 | 211 - 270 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_25121.1 | 1344 | 8e-25 | 215 - 274 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC45546 | 419 | 3e-25 | 360 - 419 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_46024 | 419 | 3e-25 | 360 - 419 | 100 | 60 / 60 | plus |
Contig Sequence (419 bp)
>U35_46024 419 Hv_44K_v2 CCTGATCTCCGTTCGCATCTCCGATGCCTCCCATGGGCATGGCTTCCACCTCCCTTCTCG TCCCCACCTCCTTCGCCCCGGCCGCAACAGCTCGCCGCAGCTTCTTCGGCCACCGCCCCC CTTCCAGCCTCCCCGCGGCCCGCCTCCGCCTCCGCCTCCCCCTCCCGCGTACGTCCTCGC TCGTCGCCTCCGCCTCGGCTTCCCCGCCGCGGTCGCTCGACGCCCTCATCTTCGACTGCG ACGGCGTCATACTGGAGTCGGAGCACCTCCACCGGCAGGCCTACAACGACGCCTTCGCGC ACTTCGGGGTACGCTGCCCGCCGGCGGCCGACGCGCCGCTGTACTGGGACGAGGCATTCT ACGACGACCTCCAGAACCGCATCGGCGGCGGGAAGCCCAAGATGCGATGGTACTTTGGA
Homology of Contig U35_46024 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |