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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_39042_PI390587928Hv_44K_v2GTATGAAAGCTGTAGCCTCTTCATCATTAATATCATGGAGCCTCTTCTACAAGCTTATAC1716GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK35559523172e-2428 - 8710060 / 60plus ABC08560 ABC42204
MLOCMLOC_54154.1419682e-24823 - 88210060 / 60minus ABC08560
MLOCMLOC_54154.133052e-241321 - 138010060 / 60minus ABC08560
MLOCMLOC_54154.239092e-241324 - 138310060 / 60minus ABC08560
MLOCMLOC_54154.1228662e-241164 - 122310060 / 60minus ABC08560
MLOCMLOC_54154.1132682e-241188 - 124710060 / 60minus ABC08560
MLOCMLOC_54154.1329002e-24913 - 97210060 / 60minus ABC08560
MLOCMLOC_54154.831712e-241220 - 127910060 / 60minus ABC08560
MLOCMLOC_54154.433192e-241236 - 129510060 / 60minus ABC08560
MLOCMLOC_54154.533162e-241233 - 129210060 / 60minus ABC08560
MLOCMLOC_54154.634092e-241233 - 129210060 / 60minus ABC08560
MLOCMLOC_54154.329392e-241319 - 137810060 / 60minus ABC08560
MLOCMLOC_54154.929492e-241217 - 127610060 / 60minus ABC08560
MLOCMLOC_54154.1012806e-241222 - 128010059 / 59minus ABC08560
JLOC1JLOC1_34847.932178e-251806 - 186510060 / 60plus
JLOC1JLOC1_34847.834398e-252025 - 208410060 / 60plus
JLOC1JLOC1_34847.730908e-251676 - 173510060 / 60plus
JLOC1JLOC1_34847.633038e-251889 - 194810060 / 60plus
JLOC1JLOC1_34847.533008e-251889 - 194810060 / 60plus
JLOC1JLOC1_34847.435798e-252162 - 222110060 / 60plus
JLOC1JLOC1_34847.337928e-252381 - 244010060 / 60plus
JLOC1JLOC1_34847.230298e-251615 - 167410060 / 60plus
JLOC1JLOC1_34847.130068e-251595 - 165410060 / 60plus
Harvest21ABC1414717763e-251717 - 177610060 / 60plus
Harvest35U35_2010017763e-251717 - 177610060 / 60plus



Contig Sequence (1776 bp)

>U35_20100 1776 Hv_44K_v2
ACGCACGCCTCCGATCCCCACGCCGAGACGGCAGCCTTAGACCTAGCCACCACAGCCGCC
GTCGGACAGTGACCTCCGCGGACTCCGCAGGCACGGGGATAAGATCACTCTACCCCAGGC
TGATTGTGGCCGGTATTGGCGATTTAAGTGTTTGTTAGGTGTTTTCTCTTGTGTCTCGTG
TCTTAATCTTTGATTAAGCTTCACTGAAAAGACTGTACCTGAGAAACTCTGTTGTTGGAA
CATTTCTCTTGTAATATGAATGTATTGTGACAATCCTTCTTCATGTGCTAGAATCATATA
TTTCAGCTTCAGAGCTTTTATGAACCTGGTGGCATATTAATCCTGGATATTTGATCGAAC
GGAAATTTGGAGCTCCTTGTTCATGTCTTCAATGGAGAGCCTAGCACAGTTAGAGGTGTT
GTGCGAAAAGCTTTACAACTCTAGAGACTCGGCTGAGAGAGCACATGCAGAAAGCACGCT
CAAGTGCTTCTCAGAGAACAGTGACTACATTTCGCAGTGCCAATATATATTGGACAATGC
GTCAACTCCATATGCCTTGATGTTGGCCAGTACAAGCTTGGTGAAGCAAGTCTCAGATCG
CAGTCTTTCTCTGCAATTGCGCCTCGATATCCGGAATTATGTCATGAACTACCTAGCGTC
AAGAGGACCTAAATTGCAGAACTTCGTGACTATTTCCCTAATTCAGCTTGCATGCCGTAT
AACAAAATTTGGATGGTTTGATGACGACAGATTCAGAGAGATTTTTAAAGAAGCAACAGA
TTTCTTGGCTCTTGCATCTCAGGATCACTATTTAATAGGATTGAAGATACTAAATTTTCT
CGTAATGGAAATGAACCAGGCAAACTCTGCAATGCCTTTGACACTTCACAGAAAAATTGC
AACTTCATTCAAGGACCAGTTTCTTCTGCAGATTTTCCAAATTTCTCTTACCTCATTACA
CCAACTGAAAAGTGAAGTACCGGATGACCTAAGGCGTGTTCCTATTTCGCTTGCATTGAG
GTGCTTGTCATTTGACTTTGTTGGTTCTCCAGTGGATGAGAGCTCTGAAGAATTTGGAAC
AGTGCAGCTTCCTGCATCCTGGAGGCCTCTCCTTCAAGATCCTTCCACTGTTCAGATCTT
TTTTGATTACTACAAAGTCAACGATACATCTGTTTCAAAAGAGGCTTTGGAATGCCTTGT
CAGACTTGCTTCTGTCAGGCGAAGTCTTTTTGTGGAAGACCCCGCCAGGTCCCAGTTTCT
CTCTCATCTGATGTCAGGCACCAGGGAGATACTCCAAACAGGCCAAGGTCTCGCTGATCA
TGGAAATTACCACGAGTTCTGCCGTCTTCTGGGACGTTTTAAAGTGAATTACCAGTTATC
AGAGCTTCTGAATGTTGAGTTCTATGGTGAATGGCTTGGCCTTGTAGCAGAATTTACAAC
TAAATCATTGCTATCATGGCAGTGGGCCAGTAATAGCGTCTACTATCTTTTAAGTCTCTG
GTCAAGGCTGGTGACATCTGTGCCTTACTTGAAAGGCGATACACCAAGCCTGCTTGATGA
AACTGTACCCAAAATTACGGAGGGTTTTATCACTTCTAGAATTAATTCTGTCCAGGCCAG
CTTTGCGGACAACTCACCAGACCCAGATAATCCGTTAGAAAATGCGGAAAGTCTCCAGGA
TCAGCTGGAGAGTCTTCCTTATCTTTGTAGATTCAAGTATGAAAGCTGTAGCCTCTTCAT
CATTAATATCATGGAGCCTCTTCTACAAGCTTATAC



Homology of Contig U35_20100 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os03g42050.110610.0protein|exportin-7-A, putative, expressed
Brachypodium v1_2Bradi1g34100.210570.0
Arabidopsis v10AT5G06120.110660.0ARM repeat superfamily protein | chr5:1844797-1852601 FORWARD LENGTH=1066