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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_38667_PI390587928Hv_44K_v2CACATCATTTCCACTGGAGCAGATTTACACAATTATAGACAATTCAACTGTACTGCATTT308GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_67257.29662e-24866 - 92510060 / 60plus ABC05216 ABC05217 ABC05218
MLOCMLOC_67257.111402e-241049 - 110810060 / 60plus ABC05216 ABC05217 ABC05218
JLOC1JLOC1_44389.113428e-25998 - 105710060 / 60plus
Harvest21ABC0521711263e-25922 - 98110060 / 60plusABC05217
Harvest35U35_494055133e-25309 - 36810060 / 60plus
Harvest35U35_1576910443e-25922 - 98110060 / 60plus



Contig Sequence (513 bp)

>U35_49405 513 Hv_44K_v2
CGTGACCCAGCTGACGCATCACGGCATGCTGTTCGTGCCGGTCGGGTACACGCACGGCGC
CGGCATGTTCGCCATGGACGAGGTCAAGGGCGGCAGCCCGTACGGTGCCGGCACCTTCGC
TGGAGCCGATGGCAGCAGGGTGCCCAGCGACGCCGAGCTCGCCCTGGCGGCGCACCAGGG
CAAGTACTTTGCCGGCATTGCCAAGAAGCTCAAAGCTGTCTGAAGTCCGATCACCGGCCG
TGTCCCGTGATTCATATCAATTAGACAGCAACGGGCGCGGTCGAGTGCGACTGTGCGAGA
TGATTTGACACATCATTTCCACTGGAGCAGATTTACACAATTATAGACAATTCAACTGTA
CTGCATTTAATTTCTTGTTTGAGAAATAATACAACTAGATGCGTTGTTGATGTTTTTGGA
CTTTCATGATTCTTGTAATCAGTCTATCTTAAAATATAAGGCATATTAGTTTTTTGAAAA
GTCAAACTTCTTTAGATTTGATCAAATTTTTAT



Homology of Contig U35_49405 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None