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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_38587_PI390587928Hv_44K_v2ATCGTATGAGCAAGGAGATCACGGCCCTTGCTCCTAGCAGTATGAAGGTTAAAGTTATTG288GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK248710.115302e-241083 - 114210060 / 60plus ABC01393 ABC05177 ABC37901
MLOCMLOC_56003.418442e-24791 - 85010060 / 60plus ABC05177 ABC37901
MLOCMLOC_56003.316372e-241188 - 124710060 / 60plus ABC01393 ABC05177 ABC37901
MLOCMLOC_56003.117012e-241339 - 139810060 / 60plus ABC01393 ABC05177 ABC37901
MLOCMLOC_56003.215502e-241108 - 116710060 / 60plus ABC01393 ABC05177 ABC37901
JLOC1JLOC1_36182.216428e-251107 - 116610060 / 60plus
JLOC1JLOC1_36182.117408e-251205 - 126410060 / 60plus
Harvest21ABC379016083e-25468 - 52710060 / 60minusABC37901
Harvest21ABC0517815163e-251078 - 113710060 / 60plus
Harvest21ABC051776413e-25376 - 43510060 / 60minusABC05177
Harvest35U35_423046083e-25468 - 52710060 / 60minus
Harvest35U35_280053663e-25289 - 34810060 / 60plus
Harvest35U35_15615443e-251078 - 113710060 / 60plus



Contig Sequence (366 bp)

>U35_28005 366 Hv_44K_v2
GACATACACATATTCTTAGGAACAAATAAGAAAGATAAATGGAGAAGGAAAACCCAAAGC
AATGCCAGAGTTGACAAAACTGCAATGGCACTTTATATGTGGCCCATCGTCAGTGAGCTG
TTTATGCCTTGCCGGACTCCTCGCAGCCTGGTGGCTTGAAGGCGATGAAGCTGACGCACT
GCACCTGACGCATGTTGTCGAATCCGATGATGCGGACATACGCGTCAGGGTACAAAAACG
GTAATGTTGTTCTCAGTGGTGGTTCTACCATGTTTCCTGGAATTGCTGATCGTATGAGCA
AGGAGATCACGGCCCTTGCTCCTAGCAGTATGAAGGTTAAAGTTATTGCACCACCTGAAA
GGAAGT



Homology of Contig U35_28005 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None