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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_38283_PI390587928Hv_44K_v2CAGGTGTGCTGGGAGAAGTTCGCGCGCTACTTCGAGGTGGAGCTCAAGGAGGTGAAGCTG508GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK36500217352e-24543 - 60210060 / 60plus ABC01373 ABC01385 ABC17092
MLOCMLOC_73968.38102e-24567 - 62610060 / 60plus ABC01385 ABC17092
MLOCMLOC_73968.29172e-24661 - 72010060 / 60plus ABC01373 ABC01385 ABC17092
MLOCMLOC_73968.19482e-24692 - 75110060 / 60plus ABC01373 ABC01385 ABC17092
JLOC1JLOC1_49276.18788e-25621 - 68010060 / 60plus
Harvest21ABC258455713e-25509 - 56810060 / 60plus
Harvest35U35_141465683e-25509 - 56810060 / 60plus



Contig Sequence (568 bp)

>U35_14146 568 Hv_44K_v2
CTGACACCTAGCTACAGGGATGGTTCTGACGCATGTTCAGAGCGACGAGGCGGCCGCGTC
GGCCGCCGTGTTCGCGTCGAGGTACGTGCAGGAGCCGGTCCCGAGCTACGAGCTCGGGGA
GAAGTCGATATCCAAGGACGCGGCGTACCAGATCATCCACGACGAGCTGCTGCTGGACGG
CAGCCCGCGGTTGAACCTGGCGTCCTTCGTCACCACCTGGATGGAGCCCGAGTGCGACCG
GCTCATCCTCGAAGGCATGAACAAGAACTACGCCGACATGGACGAGTACCCCGTCACCAC
CGAGCTCCAGAACCGGTGCGTGAACATCATAGCGCGGCTGTTCAACGCGCCGGTGGGCAC
CGGCGAGACGGCCGTCGGGGTCGGCACGGTCGGGTCCTCGGAGGCGATAATGCTCGCCGG
TCTGGCGTTCAAGCGGCGCTGGCAGAACCGGCGGAAGGCGGAGGGGAAGCCACACGACAA
GCCCAACATCGTCACGGGAGCCAATGTTCAGGTGTGCTGGGAGAAGTTCGCGCGCTACTT
CGAGGTGGAGCTCAAGGAGGTGAAGCTG



Homology of Contig U35_14146 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os04g37500.15014e-93protein|glutamate decarboxylase, putative, expressed
Brachypodium v1_2Bradi5g11640.15023e-99
Arabidopsis v10AT1G65960.24942e-83| Symbols: GAD2 | glutamate decarboxylase 2 | chr1:24552094-24557253 FORWARD LENGTH=494