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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_37656_PI390587928Hv_44K_v2CCATTGGCCTGTTTCTACTACCTCTCTAAATAAACTTGCAAGAATGACTAACATGTAAAA528GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_67858.252892e-242200 - 225910060 / 60plus ABC16611 ABC18956
MLOCMLOC_67858.148682e-241536 - 159510060 / 60plus ABC16611 ABC18956
MLOCMLOC_67856.117063e-221651 - 170610056 / 56plus ABC16611
JLOC1JLOC1_44846.338368e-252849 - 290810060 / 60minus
JLOC1JLOC1_44846.240018e-253014 - 307310060 / 60minus
JLOC1JLOC1_44846.141518e-253164 - 322310060 / 60minus
JLOC1JLOC1_44845.123888e-251558 - 161710060 / 60plus
Harvest21ABC166116453e-25527 - 58610060 / 60plusABC16611
Harvest35U35_216716473e-25529 - 58810060 / 60plus



Contig Sequence (647 bp)

>U35_21671 647 Hv_44K_v2
CAGACACAAAGTTCATCAGCAGTGCATACACGGTCAGCATCCCGCTCATGCAACGAGGCT
CGGTGACCGTCGCGCCTTACAAGCTCGTCCTACGGACCGTCATAGTTATCGCAACAACTG
TGGTGGCAATGATGATACCCTTCTTCAACGCGGTGCTAGGGCTCCTCGGCGCCTTCAGCT
TTTGGCCGCTAACCGTGTACTTCCCCATAAGCATGCACATTGCCCAGGGGAAGATCACCA
AGGGGCTCAAGTGGTATCTTCTGCAAGGTTTGAGCATGGTCTGCCTGATGATCTCAGTGG
CAGTGGGAATAGGCTCTGTGACCGACATCGTCGATAGCCTGAAGATCTCCACCCCTTTCA
AAACTGTCAGCTAGAGGATGTACAAGACTTGTAGAATAGCAGTTGAATCTGTAGGCTGAA
TCTCTGTACCGTATCATTTTTCTCTGATGTCCACGTATCGGGATGTGATATCCGATCAGT
TCCGCAAAGATTTGGAGCTAACAGCTTGTCTGGATCGGTTGTAATGACCCATTGGCCTGT
TTCTACTACCTCTCTAAATAAACTTGCAAGAATGACTAACATGTAAAATAGGAAGTGCTG
TGTTANAGGACATGCTCCTCTCTGATAAAATCGGGCCCATTCGATCC



Homology of Contig U35_21671 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os01g65660.23763e-58protein|amino acid transporter, putative, expressed
Brachypodium v1_2Bradi2g56760.14643e-59
Arabidopsis v10None