barSeed - Barley Seed Development Database

Probe ABC18956

Source Contig ABC18956

barSeed

Links

Affymetrix Source Sequence (664 bp)

>ABC18956 664
GGAGTGACGTGAGCTCTAGTGGTGTGCCGTCGGAGTTTCTTAGTGGACGTAGCCGGACAG
ACTACCAGTTTGAAGGTGAACTGGAAACTGTGTCCTGGGTTTGATCCCATTCTTCTGACC
AAAAATACCGCAGAGGTTCTTGATCAAAATTTGGCAACTATGCATCAGAAGATGTAATAA
AGGTCTTTAGCACTGCCATTATTTGAATTATTCGAGCCCCTTCTGAGCGACTGACGACGA
GAGAAGTTGTGAAAATGCTTATGGACACTGATTCTACTTCCGTATTCGGAGGGCAAAGAA
CAAGAATAATAAGTAAAAGCAGGTTACCTTTCTTTGTAAGATGCCACTATCAACAGGATG
AGGACCTTTACACTCAGAATAGCAACAACACTCTGAAGTAGCCGATTAGGACCATAGAAT
GTATTACTAGTGAGCTGGAAGCAAGTAACTAGAAGGCTGTTAATAATAACCTGGAGATGT
AGTAGCATCTGGTAGCCTCATAGGCCATGTATCTGCAGCAGTTTCTGTATAAATTCAGTC
ATATAGCTTGCAGTTTCTGTAAAAATGTTAGATGATGACTTATTGTACTGCACTGTTAGA
TAATGATGAAACATAGCAGCGTAGTCTAATTTCGACTACTTGGATCGAAAAAAAAAAAAA
AAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_67858.2	5289	0.0	2311 - 2958	100	648 / 648	CUST_37656_PI390587928 CUST_2744_PI390587928 CUST_21340_PI390587928	ABC16611 ABC18956
MLOC_67858.1	4868	0.0	1647 - 2294	100	648 / 648	CUST_2744_PI390587928 CUST_21340_PI390587928 CUST_37656_PI390587928	ABC16611 ABC18956
MLOC_67858.3	2725	0.0	1 - 616	100	616 / 616	None	ABC18956
AK356898	4090	4e-111	3873 - 4090	100	218 / 218	CUST_30616_PI390587928 CUST_32288_PI390587928	ABC03111 ABC03112 ABC18956