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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_375_PI415269222Hv_44K_v2TCATGTACAAGAACGTTCTGTCATTTCTGGAGTTAATTGCAGAAAACTTGTTAGGATTGT739GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_36363.111877e-231111 - 11709859 / 60plus ABC02113 ABC02115 ABC18641
JLOC1JLOC1_23402.111954e-231100 - 11599859 / 60plus
Harvest21ABC186419943e-25915 - 97410060 / 60plusABC18641
Harvest35U35_244699943e-25915 - 97410060 / 60plus



Contig Sequence (799 bp)

>TA49824_4513 799 Hv_44K_v2
CGACAACATCAAGGCGCAGGTGGAAGCCGTGTGCGCGCAGACTGTCTCCTGCGCCGACAT
CCTCGCCGTCGCCGCCCGCGACTCCGTCGTCGCCCTGGGAGGCCCTTCGTGGACCGTTCC
CCTGGGGAGGAGGGACTCGACGACCGCGAGCATGTCGCTGGCCAACAGCGACCTGCCGCC
GCCATCCCTCGACATCGCCAACCTCACCGCCAACTTCGCCGCCAAGGGGCTCAGCGTGAC
CGACATGGTCGCCCTCTCCGGCGCCCACACCATCGGGCAGGCGCAGTGCCAGAACTTCCG
GGACAGGCTCTACAACGAGACCAACATCGAGACGGCCTTCGCGACATCTCTCAAGGCCAA
CTGCCCCCGGGCCGACCGGGTCCGGCGACAGCACCCTGGCACCGCTGGACACGACGACGC
CCAACGCATTCGACAACGTGTACTACCGCAACCTGATGTCACAGAAGGGGCTCCTGCACT
CCGACCAGGTTCTGATCAACGACGGACGCACCGCCGGCCTGGTGCGGACGTACTCGTCGG
CGTCGACGCAGTTGAACAGGGACTTCGCGGCGGCCATGGTGAAGATGGGGAACATCAGCC
CGCTCACCGGGGCGCTGGGGCAGGTCAGGCTCAGCTGCTCCAGGGTGAACTAATTAAGCT
AGGGATCCAGCTAGAATCCCGGGCGATCAAACGGCGACGTACACAATAAGGATGTGGAGT
TATTGTATTTGTGTACTGTTCATGTACAAGAACGTTCTGTCATTTCTGGAGTTAATTGCA
GAAAACTTGTTAGGATTGT



Homology of Contig TA49824_4513 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os07g47990.13198e-92protein|peroxidase precursor, putative, expressed
Brachypodium v1_2Bradi1g17877.13217e-85
Arabidopsis v10AT5G05340.13241e-70Peroxidase superfamily protein | chr5:1579142-1580819 REVERSE LENGTH=324