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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_36472_PI390587928Hv_44K_v2TCACATCATTTTACATACCCTGTAGAGTAGAACACTATTGGGTGATAACCACCAGTGGTA135GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK36112225502e-242154 - 221310060 / 60plus ABC12604 ABC19394 ABC49863
MLOCAK36452224882e-242190 - 224910060 / 60plus ABC12604 ABC19394 ABC49863
MLOCMLOC_10033.214632e-24117 - 17610060 / 60minus ABC12604 ABC19394 ABC49863
MLOCMLOC_10033.114332e-24124 - 18310060 / 60minus ABC12604 ABC19394 ABC49863
JLOC1JLOC1_6540.214178e-251229 - 128810060 / 60plus
JLOC1JLOC1_6540.113528e-251164 - 122310060 / 60plus
Harvest21ABC1260412383e-251044 - 110310060 / 60plusABC12604
Harvest35U35_468835093e-25136 - 19510060 / 60minus



Contig Sequence (509 bp)

>U35_46883 509 Hv_44K_v2
TTTTTTTTTTTTTTTTTCGATTGCAGAACGGTCTTATTAGCTTAAAACCCCGATGAGGCT
GCCGGTTCCGGTTTCTTTCGGTCCGGTCCGGTTTTTTAAACTAGGACACACACACACACA
CACACACCCACAATGTACCACTGGTGGTTATCACCCAATAGTGTTCTACTCTACAGGGTA
TGTAAAATGATGTGAAACAGTAGCACACAGTATATATATTACAGTCAACTGTACATGCTG
CCACCACACCGCACCATAGCTAACGGTGGCGGCCAGTATCACACAAGAACAGAAAAGAAA
ACAACTTCACACTGAAGATTTCCTTGAAGAGGGCAACTATACCAGTTGCGCTGATCATTT
GTATGTGCAGGAGCAACCATAGCATCCATATCTCTGTTCAGTATTTGTGCTTCGAAGAAA
CCAAATATTTCCAGGAGTTTGATTCCCATAGTTTAGGTCCTGTCAGAAGTATAAAAAATA
ACCTTCACATGTAACGTTGTTGCTGGCTC



Homology of Contig U35_46883 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None