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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_36165_PI390587928Hv_44K_v2CCTTTAGGTATGCAGAATCAATTAATTTTGGACTGGAGAAGTGTCGGAATATAGTATATG301GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK251994.130052e-242688 - 274710060 / 60plus ABC12390 ABC18016 ABC18418
MLOCAK35557440442e-242432 - 249110060 / 60plus ABC12390 ABC18016 ABC18418
MLOCMLOC_58880.17419e-22314 - 36810055 / 55minus ABC12390 ABC18418
MLOCMLOC_58879.111919e-22427 - 48110055 / 55minus ABC12390 ABC18418
MLOCMLOC_58879.224339e-221669 - 172310055 / 55minus ABC12390 ABC18418
JLOC1JLOC1_38279.210515e-22522 - 57610055 / 55plus
Harvest21ABC501006323e-25302 - 36110060 / 60minus
Harvest21ABC497346183e-25349 - 40810060 / 60minus
Harvest21ABC269557192e-2272 - 12610055 / 55plus
Harvest35U35_483836323e-25302 - 36110060 / 60minus
Harvest35U35_1921411643e-25690 - 74910060 / 60plus
Harvest35U35_282177192e-2272 - 12610055 / 55plus



Contig Sequence (632 bp)

>U35_48383 632 Hv_44K_v2
ATTGATTGAGAAAATAGTAAAATAGAAATGGAGGACGTGGAGTGGAGGAGGGAAAGGGTG
GATGAAAAAAGAAACGTAAAACAGAACCTTACCTTTTTTTTGGGGCACACATACACCCAC
ACGCACAAGCGCGCACGTGCGCGCGCGCACACACACACACACTTATATACATTGTATATA
GTCCCTTAATCTTATATGTGTTCCATGTTCATTCCCACATGATAAATGTGGTACAAATTA
AAATGAATGTCGAAAACACTAGAGGAAATTGTATTTTTCATTTACCTTCTTATGCTCTTA
ACATATACTATATTCCGACACTTCTCCAGTCCAAAATTAATTGATTCTGCATACCTAAAG
GTAGTGGTGTTGCACAAACCAAGGCTCTCGTCCTGGAAAGTTCTAATCAGCAGTTGAGGG
TCCGGGTGACGATATACCACACGAGCACGGCAGCCGGCAGAACCTATGCTGGTTCCTTTG
ATTACTCGAACACATTTGTGTGTCCGCAAATCCCAGATCCGAGTATTCCCAGCTATACAT
CCTGTAATAATGTATTGCTCATTACCACCCGGAAGGAAATAATCGAGATCCATCACTTGT
TCCATCTGGCAGTCTAACATGGCGATTGGAGG



Homology of Contig U35_48383 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None