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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_35933_PI390587928Hv_44K_v2TTGAAAGTAGACTATCGGCATATCCTGTATGAATTGAACAGTGGCTTGATCCTATGGCTG286GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK3577036192e-24370 - 42910060 / 60plus ABC12517 ABC16647 ABC26243
MLOCAK252842.15342e-24299 - 35810060 / 60plus ABC12517 ABC16647 ABC26243
MLOCMLOC_63759.14872e-2479 - 13810060 / 60plus ABC12517 ABC26243
JLOC1JLOC1_41802.19838e-25620 - 67910060 / 60plus
Harvest21ABC525105823e-25343 - 40210060 / 60plus
Harvest21ABC262434403e-25287 - 34610060 / 60plusABC26243
Harvest21ABC125175943e-25370 - 42910060 / 60plusABC12517
Harvest35U35_135724403e-25287 - 34610060 / 60plus
Harvest35U35_59756093e-25370 - 42910060 / 60plus



Contig Sequence (440 bp)

>U35_13572 440 Hv_44K_v2
CGTTCACACACCGGTCCAGAGGCCGCCGCCGCCGCCGCCGCCGTCGGCCGCTACGAGAAC
CCCAGTTATACCGCGAGTGCTTAAGGAGGGCTAAGTTCATCGGTAGTCAGCAACATAATA
CAGGGCTTCTTGTTTCCATGGTGAGGGAACAGTTCAAGAAAAACATGCATGAAACTGATC
CAGAGAAGATACAGAAAATGAAGGATGATGCGGCACGGGGCCTTATCAATCACATAATAT
ATGAATCCGAGAAGATGACGGGGCGTAAATTCTCAGGTTAAGAAAGTTGAAAGTAGACTA
TCGGCATATCCTGTATGAATTGAACAGTGGCTTGATCCTATGGCTGTTGAATTGTTTTTC
TCTTCCGACACAAGGACCATCTAATGCTTTTATTTGTTGTTGACTTAATAAAGCAGTGAT
TTTTCAAAAAAAAAAAAAAA



Homology of Contig U35_13572 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None