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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_35785_PI390587928Hv_44K_v2CTTTATGGTGTACTAGCCCATGATAAATTGGTGATAGAAGAAATGGATTGTGTCTACAAA497GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_28859.28422e-23655 - 71210058 / 58plus ABC00077 ABC00195 ABC12818
JLOC1JLOC1_19300.16771e-23509 - 56610058 / 58plus
Harvest21ABC002106333e-25498 - 55710060 / 60plus
Harvest21ABC000775998e-21490 - 5449854 / 55plusABC00077
Harvest35U35_15666333e-25498 - 55710060 / 60plus
Harvest35U35_15655998e-21490 - 5449854 / 55plus



Contig Sequence (633 bp)

>U35_1566 633 Hv_44K_v2
GCTTGAGGAATCGACTATTGTTTCCTTTTGTTGTTCTTGTGATCTTCGGTTGTGAGAAGA
AGTCAAGGGAAACACGTTCAATGGCACGGGGAACCATCGTACCCACCCTTCTAGTGTTCC
TTCTGGCCGTTTGTTGTGCAACCTCCGTTGTGCATGGCAAAGAGTGGACCGTCGGTGACA
ACAAGGGATGGAGCTTCGGCGTCTCCGGTTGGGAGAATGGCAAGCGCATCCAGTCCGGCG
ACATGCTTGTGTTCAAGTACAACCCGAGTATGCACAACGTGGTGCAGGTGGGAGAAAGCG
ACTACAAGTCATGTACGGTTTCTGGCCCGTCGAGGGCGTACACCTCCGGTAATGACCACA
TCCAGCTTGCCCGCGGTGGCAAAGCATTCTTCCTCTGCAGCGTTCCGGGCCACTGCCAGA
AGGGCATGAAGATCGCTGTCACTGCTTAATAGATCTCGCGCATATGTGTGTCTATGTATT
TTTACTTCGTACCAAATCTTTATGGTGTACTAGCCCATGATAAATTGGTGATAGAAGAAA
TGGATTGTGTCTACAAAAAAAAAAAAAAGAAACCAACAGCTATTTGGACTAGCTATTGGA
AATAAAAAAGTAGGAATAAGTGTTTTCCATTAT



Homology of Contig U35_1566 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None