- Probe CUST_35122_PI390587928
- Source Contig U35_13989
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_35122_PI390587928 | Hv_44K_v2 | TAGTAGTTGTTGTCTGAATGCTGTATGGTTGCCAACACTTTGTTGGCTCGTTCGTTGTAT | 542 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| MLOC | MLOC_38134.3 | 2284 | 2e-24 | 2094 - 2153 | 100 | 60 / 60 | minus | ABC01124 ABC02841 ABC05257 ABC47224 |
| MLOC | MLOC_38135.1 | 791 | 2e-24 | 498 - 557 | 100 | 60 / 60 | minus | ABC01121 ABC01122 ABC01123 ABC01124 ABC01125 ABC01127 ABC01128 ABC01131 ABC01136 ABC01140 ABC01141 ABC01142 ABC01143 ABC01146 ABC01147 ABC01151 ABC01154 ABC01156 ABC01157 ABC01161 ABC01162 ABC01166 ABC01167 ABC01177 ABC01179 ABC01184 ABC31601 ABC31617 ABC37479 ABC47224 ABC49951 |
| MLOC | MLOC_38134.4 | 2383 | 2e-24 | 2094 - 2153 | 100 | 60 / 60 | minus | ABC01121 ABC01122 ABC01123 ABC01124 ABC01125 ABC01127 ABC01128 ABC01136 ABC01143 ABC01146 ABC01147 ABC01154 ABC01157 ABC01161 ABC01166 ABC01177 ABC02841 ABC05257 ABC31601 ABC31617 ABC37479 ABC47224 ABC49951 |
| JLOC1 | JLOC1_24774.1 | 782 | 8e-25 | 489 - 548 | 100 | 60 / 60 | minus | |
| Harvest21 | ABC01160 | 648 | 3e-25 | 554 - 613 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC01144 | 668 | 3e-25 | 543 - 602 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC01124 | 797 | 3e-25 | 650 - 709 | 100 | 60 / 60 | plus | ABC01124 |
| Harvest21 | ABC47224 | 260 | 2e-22 | 60 - 117 | 98 | 57 / 58 | minus | ABC47224 |
| Harvest35 | U35_13998 | 796 | 3e-25 | 651 - 710 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_13989 | 668 | 3e-25 | 543 - 602 | 100 | 60 / 60 | plus |
Contig Sequence (668 bp)
>U35_13989 668 Hv_44K_v2 GCCCCACTTTCCCTTCCAGCAAACTCACACAACCCACCACCGAATCTCCCAACCCCACTC GAAGCAGCAGCAGCCATGGCCCCCAAGGCAGACAAGAAGCCGGCCGCCGAGAACAAGGTC GAGAAGGCGGCGGAGAAGACCCCCGCCGGCAAGAAGCCCAAGGCCGAGAAGCGGCTGCCG GCGGGGAAGACGGCGTCCAAGGAGGCCGGCGGCGAGGCGAAGACCAGGGGCCGGAAGAAG GGCAGCAAGGCCAAGAAGAGCGTGGAGACGTACAAGATCTACATCTTCAAGGTGCTGAAG CAGGTCCACCCCGACATCGGCATCTCCTCCAAGGCCATGTCCATCATGAACTCCTTCATC AACGACATCGGCGAGCTCGCCAAGCACGCCGTCTCCGAGGGCACCAAGGCAGTCACCAAG TTCACCTCCTCCTAGACTGCCGATGCGTCCGTCGCCTGAAGTAGCAGATGCGGTTGTCTG CCGTTGTCTCCTCTTAGTGGTTGCTGACCTGGTTATCTATCTGCCACTGCCAGTAGAAGT AGTAGTAGTTGTTGTCTGAATGCTGTATGGTTGCCAACACTTTGTTGGCTCGTTCGTTGT ATGAGCTGAAGCTGCCGATCTATCTGAATGTTTATGTTGCAAGCAGTACTATTACTGAAT TTCATGGG
Homology of Contig U35_13989 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |