barSeed - Barley Seed Development Database

Probe ABC47224

Source Contig ABC47224

barSeed

Links

Affymetrix Source Sequence (260 bp)

>ABC47224 260
CACCAAGGCAGGCACCAAGTTCACCTCCTCCTAGACTGCCGATGCGGCCGGCGCCTGAAG
TAGCAGATGCGGTTGGCTTCCGTTGTCTCCTCTTAGTGGTTGCTGACCTGGTTATATATC
TTCCACTGCCAGTAGAAGTAGTGGTAGTTGTTGTCTGAATGCTGTATGGTTGCCAACACT
TTGTTGGCTCGGTCGTTGTATGAGCTGAAGCTGCCGATCTATCTGAATGTTTATGATGCA
AGCAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_38135.1	791	1e-107	455 - 698	95	233 / 244	CUST_13093_PI390587928 CUST_35122_PI390587928	ABC01121 ABC01122 ABC01123 ABC01124 ABC01125 ABC01127 ABC01128 ABC01131 ABC01136 ABC01140 ABC01141 ABC01142 ABC01143 ABC01146 ABC01147 ABC01151 ABC01154 ABC01156 ABC01157 ABC01161 ABC01162 ABC01166 ABC01167 ABC01177 ABC01179 ABC01184 ABC31601 ABC31617 ABC37479 ABC47224 ABC49951
MLOC_38134.4	2383	1e-107	2051 - 2294	95	233 / 244	CUST_27667_PI390587928 CUST_13093_PI390587928 CUST_35122_PI390587928	ABC01121 ABC01122 ABC01123 ABC01124 ABC01125 ABC01127 ABC01128 ABC01136 ABC01143 ABC01146 ABC01147 ABC01154 ABC01157 ABC01161 ABC01166 ABC01177 ABC02841 ABC05257 ABC31601 ABC31617 ABC37479 ABC47224 ABC49951
MLOC_38134.3	2284	7e-85	2051 - 2247	95	188 / 197	CUST_27667_PI390587928 CUST_13093_PI390587928 CUST_35122_PI390587928	ABC01124 ABC02841 ABC05257 ABC47224
MLOC_10557.1	1849	2e-61	1522 - 1756	85	207 / 244	CUST_35087_PI390587928 CUST_35150_PI390587928	ABC01122 ABC01123 ABC01124 ABC01125 ABC01127 ABC01136 ABC01146 ABC01147 ABC01154 ABC01161 ABC01166 ABC01167 ABC01177 ABC31617 ABC47224 ABC49951
AK356272	753	7e-60	500 - 734	84	206 / 244	CUST_35087_PI390587928 CUST_8867_PI390587928 CUST_35150_PI390587928	ABC01121 ABC01122 ABC01123 ABC01124 ABC01125 ABC01127 ABC01128 ABC01129 ABC01131 ABC01132 ABC01133 ABC01136 ABC01137 ABC01138 ABC01140 ABC01141 ABC01142 ABC01143 ABC01146 ABC01147 ABC01150 ABC01151 ABC01154 ABC01156 ABC01157 ABC01158 ABC01161 ABC01162 ABC01164 ABC01166 ABC01167 ABC01169 ABC01177 ABC01179 ABC01180 ABC01181 ABC01184 ABC16131 ABC30555 ABC31601 ABC31617 ABC31619 ABC31825 ABC37479 ABC47224 ABC49951