barSeed
Links

Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_34768_PI390587928Hv_44K_v2AATATACTAATCCGTTGCTTTGCTTCTGCTTCTGCTTCCGTTGCACGATTTTTCAGGGGC204GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_40996.13782e-24216 - 27510060 / 60plus ABC06632
Harvest35U35_411785643e-25205 - 26410060 / 60plus



Contig Sequence (564 bp)

>U35_41178 564 Hv_44K_v2
GCGCGCGGCGCCGGCGCGGGCGGGGCTCCGGCGGAACTCGGCCGACTACTCCAAGGTCGA
GACCGCTGCGTTCCTCCGCCACTGCGGCCTCTGCCGCCGCCTCCTCGGCCCCGGCCGCGA
CACCTTCATGTACAAGTACGTGAGCTAGCTGTCCGCCCCTGCACTCCATGCACGTGCATC
CATGGCCAAGTTGTACCACTATCCAATATACTAATCCGTTGCTTTGCTTCTGCTTCTGCT
TCCGTTGCACGATTTTTCAGGGGCGAGGCGGCCTTCTGCAGCCTCGAGTGCCGGCAGCAG
CACATAACGCACGAGGAGTGGAAGGACAAGTGCACGTCAAGGTCGCCGGCGCCGGCGCCG
GCGACCAGCCGCGGCCGCTCCGGCAAGACAGACACCGGCGGCACGGTGGCGGCGGCCTGA
TCAGGGCGCACGAGAGGCAGGCAGGCAGGCTATCATCTTCCGAAGCTACCAGCTCTAGAA
GTTGTCGCTTCTCAGCGCTACGACGCATGTATTACTCGTACGCACGTTCGTACGTACGAA
CGCCTCGAAAACGAATCGATCTCT



Homology of Contig U35_41178 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None