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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_34745_PI390587928Hv_44K_v2TAGTTCAGAACAGTCAGTCGGAACCGCAGGAGCCATCTTCACCTTAAAGGTTTTCCTTTT472GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_54996.131692e-241723 - 178210060 / 60minus ABC10091 ABC10092 ABC21364
MLOCMLOC_54998.117682e-24316 - 37510060 / 60minus ABC10091 ABC10092
Harvest21ABC1009116593e-251270 - 132910060 / 60plusABC10091
Harvest35U35_188078623e-25473 - 53210060 / 60plus



Contig Sequence (862 bp)

>U35_18807 862 Hv_44K_v2
GCACGTGTGATGGTGCTTGCTGCTACAAACAGACCTTCCGAGCTAGATGAGGCCATCCTC
AGGCGCTTCACGCAGATATTTGAAATTGGGGTTCCTTCTCGCAGTGAAAGAAGCAAGATA
CTTCAGGTTATACTGAAGGGAGAAAACGTCGAGTCTAACATTGATTACGATTACATTGCC
AGCTTGTGTGAGGGCTTTACTGGGTCAGACATCCTAGAACTGTGCAAGCAGGCTGCATTC
TATCCTATCAGAGAGATTTTGAACAGCGAGAAAGATGGGACAAGAGCAAACAGTCCAAGA
GCCTTGAGGCAATCGGACCTGGAGAAAGCTCTTTCAACATCTAGAAAGGGAAAGAAGGCC
GCAAGCGGTGCGGCGTCAGGTTTCCAGTCTCCTGTGTGGACCCGTCCGTCGGATCCTGAA
GATGACCAGGTACAGAGCGCAATCTTTGAGATATCTAAGCTGATGTCTCGAATAGTTCAG
AACAGTCAGTCGGAACCGCAGGAGCCATCTTCACCTTAAAGGTTTTCCTTTTGCTAGATC
TCTGAAAAATCCGCAGTGGAGTAAGAGCTGGCATTACCTACCTAGATTCAGCATATGTAT
TGGTTCGGTTAGCGTCATGGGGCTGCTCTCTGGTTTTTGAAGTTAATTGCAGCTGGCAAA
GCCTGCACTGATGTTTTGGGTTCCATGGTTCTCTGTGTGGAAAATACAGAATTCTATACT
TCTGTGGAACATTTGGTCTGTTCGTCACCTTGTAATTTTCCTTTTGGAACATGACTATTG
TAGGGTAGACAGACTCTAATACGTACTGAAGAAATGTGCCCTTCCATCATCATTCCACGG
TTCACAAAAAAAAAAAAAAAAA



Homology of Contig U35_18807 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os06g50050.13945e-80protein|AAA-type ATPase family protein, putative, expressed
Brachypodium v1_2Bradi1g35110.13945e-83
Arabidopsis v10None