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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_34228_PI390587928Hv_44K_v2GCAAGCCTTCGGAGCAAAGCAGTACCATCTTCTTGGACTCTACAAGCAGAGGGCAATCCT278GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK35824339063e-21421 - 4809758 / 60plus ABC09322 ABC11562 ABC12169 ABC15296 ABC23889 ABC45897
MLOCMLOC_37235.221793e-21566 - 6259758 / 60plus ABC12169 ABC15296 ABC23889 ABC45897
MLOCMLOC_37235.319833e-211362 - 14219758 / 60minus ABC12169 ABC15296 ABC23889 ABC45897
MLOCMLOC_37235.817973e-211317 - 13769758 / 60minus ABC12169 ABC15296 ABC23889 ABC45897
MLOCMLOC_37235.919303e-211450 - 15099758 / 60minus ABC12169 ABC15296 ABC23889 ABC45897
MLOCMLOC_37235.621643e-211469 - 15289758 / 60minus ABC12169 ABC15296 ABC23889 ABC45897
MLOCMLOC_37235.728703e-211336 - 13959758 / 60minus ABC12169 ABC15296 ABC23889 ABC45897
MLOCMLOC_37235.1013413e-21409 - 4689758 / 60minus None
MLOCMLOC_37235.519363e-211244 - 13039758 / 60minus ABC12169 ABC15296 ABC23889 ABC45897
MLOCMLOC_37235.418033e-211270 - 13299758 / 60minus ABC12169 ABC15296 ABC23889 ABC45897
MLOCMLOC_37235.121063e-211571 - 16309758 / 60minus ABC12169 ABC15296 ABC23889 ABC45897
JLOC1JLOC1_24088.221192e-21469 - 5289758 / 60plus
JLOC1JLOC1_24088.120362e-21386 - 4459758 / 60plus
Harvest21ABC220453371e-24279 - 33710059 / 59plus
Harvest35U35_253203383e-25279 - 33810060 / 60plus



Contig Sequence (338 bp)

>U35_25320 338 Hv_44K_v2
CCAAGCATGGAGGAGCCCCTTGTCGGAGGCAACATTGAGAAGACAGGAGGGCCAGGAGAG
AGCCTCTTAGTGATTGAGGTCAAGAAGCAGTTGTACCTTGCCGGGCCTCTCGTCGTTGGA
AGCCTGCTGCAGAATGTCGTCCAGATGATATCGGTCATGTTTGTCGGTCATCTCGGTGAG
CTCGATCTCTCGAGTGCCTCCATCGCCACCTCCTTTGCCGGTGTCACCGGCTTCAGCTTA
TTGGCCGGCATGTCGAGCAGCTTGGACACACTGTGTGGGCAAGCCTTCGGAGCAAAGCAG
TACCATCTTCTTGGACTCTACAAGCAGAGGGCAATCCT



Homology of Contig U35_25320 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os10g11354.14862e-53protein|MATE efflux family protein, putative, expressed
Brachypodium v1_2Bradi5g07150.34812e-61
Arabidopsis v10None